Ochotona princeps (American pika): 101521767
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Entry
101521767 CDS
T07609
Symbol
THSD1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101521767 (THSD1)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
101521767 (THSD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D2
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Defensin_4
Motif
Other DBs
NCBI-GeneID:
101521767
NCBI-ProteinID:
XP_004577557
LinkDB
All DBs
Position
8:complement(19994293..20017112)
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AA seq
849 aa
AA seq
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MKPMLQDFSNLLLVVLCDYVLGEAEYLFLREPGHVALSNSTVSVDFRYFDEGNGTLRNVS
VLLWEASTNQTVTTKSLLTNQSQGTLEFECFCFKEAGDYWFLTMAPEVTDNSTPFPWWER
GALLKVEWPVFHIDLNRTSWAAEGTFQVGFSTSQPLCPFPVDQPSVLVDVTFANSLPETR
TGPGQPLEIRTSKRTGLAQGQWVEFGCAPVGPEAYVTVVLKLLGRDSVMATTGPIDLARK
FGYNLVMAPELTCESAVEVMVLPPPCIFVQGVMAVFKEAPRRPGEGTVQVAQNSLPLGER
RTAFNCTLFDVGKNKYCFEFGASRKSQLSTKEKECMLIQRNIETWGLWQPWSQCSTTCGD
GVRERRRVCLTSFPSRPGCPGPSLETSLCSLEECAALRPSSSSPLQPQGPVKSNNVVTVT
GISLCMFIIVATVLITLWRRFGRPAKCSTPARHNSLHSAGFRKNSDEENICELSEPRGSF
SDGGDGPAGSPGDMGIPLTYRRSVPAAPEDDASGSESFQSNAQKIIPPLFSYRLAQQQLK
EMKKKGLTETTKVYHVSQSPLTDTAVEAAAGAPLDLESPEEAAANKFRIKSPFAEQPAVS
AGDRPPSRLDRGTSQTACAISPSQTLIRKSQIRHVGVRGLPADRSHPRNSHFRRTASFHE
AKQARPFRERSMSTLTPRQVPSAYGSRMRPWDQAEDKSRPQSRGPHPLPEKQEPVQGSSG
PLSPLPKCYALGQPSRKPELGDHRHTGVERTEPHRARRGPSPSHRSLSRKQSSPTRPRDG
YQRVSPLSPSQCRKDKCQSFPTQPEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEEDETTS
TLSVEKLVI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatgttgcaagatttttccaatctgctgttggtggtgctctgtgactacgtt
cttggtgaagctgaatatctcttcttgagagaaccaggccatgtagccctgagcaacagc
acggtgtctgtggatttccggtactttgatgagggtaatgggaccctaaggaatgtgtct
gtcctgctttgggaagccagcaccaatcagactgttactaccaagtccctcctgaccaac
cagtcccaggggacgctggagtttgaatgcttctgcttcaaggaagctggtgactactgg
ttcctgacaatggctccagaagtgacagacaacagcactcccttcccgtggtgggagaga
ggtgccttgctgaaggtggagtggcccgtctttcacattgacttaaacaggacatcctgg
gcagcagaaggtaccttccaggtgggcttctccaccagtcagcccctgtgcccctttcct
gtggaccagcccagtgtcttggtggacgtaactttcgccaatagccttcctgagacaaga
acgggtcccggacagccactggagataagaaccagcaaaaggactgggctcgcacagggc
cagtgggttgagtttggctgtgcaccagtggggccagaagcatatgtcactgtggtgctc
aaactgcttggcagggactcggtcatggccaccacagggcccattgacctggcccggaag
tttggatacaacctagtcatggcgccagaactcacgtgtgagtctgcggtggaggtcatg
gtgctgccgccgccatgcatctttgtccaaggagtgatggctgtgttcaaggaggccccc
aggcgcccaggggaggggactgtccaggtggcccagaacagcctgccactgggagagagg
agaaccgcattcaactgcacgttgtttgatgtggggaaaaacaaatactgctttgagttt
ggtgcatcaagaaaaagccagctttctacaaaggaaaaggagtgcatgctcattcagaga
aatatagagacttggggactgtggcagccatggagccagtgtagcaccacatgtggggat
ggtgtcagagagcgtcgccgggtgtgtctcacctccttcccctccagacccggctgtcct
ggaccgtccttggagacctctctgtgctccctggaggagtgtgctgcgctccggccttct
agctcatctcctcttcagccccagggtccagtgaagtctaacaacgtggtgaccgtcacg
ggcatctccctatgcatgttcatcattgtggccaccgtactcatcacgctgtggaggaga
tttggccgcccggccaagtgcagcacccctgcccgacacaactccctccactctgctggc
ttccggaagaattcggacgaggagaacatctgcgagttaagcgagccacggggcagcttc
tcggatgggggtgatgggcccgcggggagccctggtgacatgggtatccccctgacctat
cggcgcagcgtgcccgcggctcccgaggatgacgcctctggcagcgagagcttccagtcc
aacgcccagaagatcatcccgcctctgtttagttaccgtctggcccagcagcagttgaag
gagatgaagaagaaagggctgacggagaccaccaaagtgtaccacgtatctcagagtccc
ttgacggacacagctgttgaggctgctgctggcgcccccttagacttggaaagcccggaa
gaagcagctgccaacaagttccgcatcaaatcccccttcgctgagcaacctgcagtcagt
gctggggacagacctccctccaggctggatcgaggcacatcccagaccgcttgtgccata
agccccagccagaccctgatccgcaagtcccagatcaggcatgtgggtgtcagagggcta
cccgcagacaggagccatcccaggaattcccacttccggaggacagctagttttcacgaa
gccaagcaggcccggccgttcagggagaggagcatgtccacgctcaccccacgtcaggtc
cccagtgcctacggttctaggatgcggccctgggaccaggcagaggacaaatcccggcct
cagagtcgagggccccacccacttcctgagaaacaggagcctgtgcaaggcagcagcggc
cccttaagtccactccctaaatgctatgccttggggcagccttcaaggaaaccggagctg
ggtgaccaccgccacacaggggttgagagaacagagccacatagggcccggaggggacca
tcccccagtcacaggagtctctcaaggaagcagtcctcccccacccgccccagagacggc
taccagagggtcagcccactgagcccttcacagtgcaggaaggacaagtgtcagagcttc
ccaacccagcccgagttcgccttctacgacaacacatccttcggcctcaccgaggctgag
cagaggatgctggacctcccaggttactttggatccaatgaagaggatgaaaccaccagc
acgctgagtgtggagaagctggtgatctaa
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