Ochotona princeps (American pika): 101521883
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Entry
101521883 CDS
T07609
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi05202
Transcriptional misregulation in cancer
opi05206
MicroRNAs in cancer
opi05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101521883 (ZEB1)
05206 MicroRNAs in cancer
101521883 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
101521883 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101521883 (ZEB1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
101521883 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
101521883
NCBI-ProteinID:
XP_012783410
LinkDB
All DBs
Position
16:71719902..71884223
Genome browser
AA seq
1110 aa
AA seq
DB search
MKVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGVPEDELPTDPTVLPGRGEREG
SSKNCWEDDAGKEGSEILGPEAQADGAGCSVKDDECDSDAENEQNHDPNVEEFLQQQDTA
VIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKN
EDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRKFKCTECGKAFKYKHHLK
EHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRAGIKTSQCSSPSL
SASPGSPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKPIVVASGINCSAPLQNGVFS
GGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQANL
ASKEQEAISASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKEN
PVPTNSCKIEKLPEDLTVKSEKDKSFEGGASDSTCLLCDDCPGELNALPELKHYDLKQPA
QPPPVPAPEAEKPETSIPAGTGDASLSPSHPPLKNLLSLLKAYYALNAQPSAEELAKIAD
SVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGRANVPVKTEDQPQPANENEAQDGTQS
LPSPLKKTDSPVPPAGPAVNGSRSSTPLPSPLNLSSARNSQGYSYTAEGAPEEPQVEPLD
LSLPKQQGELLERPTITSVYQNSVYSVQEEPLNLSCAKKEPQKDSCATDSEPVVSVIPPS
ANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAVQEP
PLKVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKS
SSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYS
QHMNHRYSYCKREAEERESAEPEEAGPDALRSEPVGAPASPSQADSDERESLTREEEEES
DKEEEEEEDKEMEELQDAKECEKPQGDEEEEEEEEEDVEEEEVEEAENEGEEAKPEGPRE
EAGAVSEASGFEQKVSEGSEQVSEERTNEA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttacaaattacaatactgtggtggaaacaaattcagattcagatgatgaagac
aaactccatattgtggaagaagaaagtattacagatgcggcggactgtgaaggtggtgtg
ccagaagatgagctgccaacagacccgacggtgctgccaggacgcggtgagagagaaggc
agttctaagaactgctgggaggatgatgcaggcaaggaagggtcagaaatcctggggcct
gaagctcaggccgatggagcaggatgttcagtaaaagatgatgaatgtgactcagatgca
gaaaatgaacaaaaccacgatcctaatgttgaagagttcctgcaacaacaagatacagcc
gtcatttaccctgaggcgcctgaagaagaccagaggcagggaacgccagaagccagtggt
caagatgaaaatggaacaccggatgcattctcccagttgctcacctgcccatattgtgat
agaggctacaaacgctttacctctctgaaagaacacatcaagtatcgccatgaaaagaac
gaagacaacttcagttgctccctgtgcagttacacctttgcctacagaacccagcttgaa
cgtcatatgacgtcacacaaatcggggcgggatcagagacacgtgacacagtctgggggt
aatcgtaaattcaagtgtactgaatgtggaaaagctttcaaatacaagcaccacctaaaa
gagcacttaagaattcacagcggagagaagccatatgaatgcccaaactgcaagaaacgt
ttttcccactctggttcctatagctcccacataagcagtaagaaatgcatcagtttgatg
cctgtgaatgggcggccacgggcagggatcaagacgtctcagtgttcctccccctctctg
tcggcatccccaggcagtcccacccgaccacagatacggcagaagatagagaataaaccc
cttcaagaacaactttccgtaaaccaaattaaaactgaacctgtggattatgaattcaaa
cccattgtggttgcttcaggaatcaactgttcagcccctttacaaaatggggtttttagt
ggtggtggcccattgcaggcgaccagttctcctcagggtgtggtgcaagctgttgttctg
ccaacagttggtttggtgtctcccatcagtatcaatttaagtgatattcagaatgtactc
aaagtggcagtagacggtaatgtaataaggcaagttttggaaaataatcaagccaatctt
gcatccaaagaacaagaagcaatcagtgcttcgtccatacaacaaggtggccattctgtg
atttctgccatcagtcttcctttggttgatcaagatggaacaaccaaaatcatcattaac
tacagcctggagcagcccagccaacttcaggttgttcctcaaaatttgaaaaaagaaaac
ccagtccccacaaacagctgcaaaattgaaaagttgccagaagatctgactgtcaaatct
gagaaggacaaaagctttgaaggaggagccagtgatagcacttgccttctgtgtgacgac
tgtccaggcgagctgaatgcacttccggaactcaagcactatgacctgaagcagcctgca
cagcctcctccagtccctgccccagaagccgagaagcccgaaacctccatcccagcaggc
actggagatgccagtttgtctcccagtcacccacctttaaagaacctcctgtctcttctc
aaagcatactatgctttgaatgcccagccgagcgcggaagagctcgcaaaaatcgcagat
tcagtaaacctaccactggacgtggtgaaaaagtggtttgaaaagatgcaagctggacag
atttcagtgcagtcttctgaaccatcttctccggaaccaggcagagcgaatgtccctgtg
aagacagaggatcagcctcaaccggcaaatgaaaacgaagcccaagatggcacacaaagt
ctgccgagtcctctgaagaagacggactctccagttccacccgcgggaccagccgtcaat
ggttctagaagcagtaccccactcccgtcccctctcaacctttcctcagccaggaattca
cagggttactcctacacagcagaaggtgcaccagaagagccccaagtggaacctcttgat
ctttcactaccaaagcaacagggagaattattggaaaggccaaccattaccagtgtttac
cagaacagtgtttattctgtccaggaggaacccttgaacttgtcatgtgcaaaaaaggag
ccacaaaaggacagttgcgctacagactcagaaccagttgtaagtgtaatcccaccaagt
gccaaccccataaatatcgctatacctacagtcactgcccagttacccacaatcgtggcc
atcgctgaccagaacagtgttccgtgcttaagggcactggctgccaataagcagactatt
ctgattccccaggtggcttacacgtactcagccactgtcagccctgccgtccaggagcca
cccttgaaagtcatccagccaaatggaaatcaggatgaaaggcaagacactagctcagag
ggggtatcaaacgtagaggatcagaatgactctgattctacgccacccaaaaagaaaatg
cgaaagacagaaaatggaatgtatgcatgtgacttgtgtgataagatattccagaagagt
agctcattgttgagacataaatatgaacacacaggcaaaagacctcacgagtgtgggatc
tgtaaaaaggcctttaaacacaaacatcatttgattgaacacatgcgactgcactctgga
gagaagccctatcaatgtgacaaatgcggaaagcgtttctcgcactcggggtcgtactct
cagcacatgaaccaccgctactcatactgcaagagggaggccgaagagcgcgagagcgcg
gagccagaggaggcagggccggacgccctaaggagtgagccagttggggcccctgcctcg
ccctcccaggccgactctgatgagagggagagtttgacgagggaggaggaggaagagagt
gacaaagaggaagaagaggaggaagacaaagagatggaggaattacaggatgcaaaggaa
tgtgagaaaccgcaaggggatgaggaagaggaggaggaggaggaagaggatgtggaagag
gaagaagtggaagaggcagagaatgaaggagaagaagcaaaacctgaaggtccaagggag
gaggccggggctgtgagtgaagcaagcggcttcgaacaaaaagtgagcgagggtagcgag
caagtatccgaagagagaacgaatgaagcctag
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