Ochotona princeps (American pika): 101521903
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Entry
101521903 CDS
T07609
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101521903 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101521903 (EFL1)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
Pre-60S particles
GTPases
101521903 (EFL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
101521903
NCBI-ProteinID:
XP_004594726
LinkDB
All DBs
Position
17:complement(85945029..86061821)
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AA seq
1068 aa
AA seq
DB search
MVLNSLEKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQVRGITMKSSAISLHYAEGNDEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKMDRLIVELKFTPLEAYSHLKNILEQINALTGTL
FTSKVLEERAERETECQVKPSSAQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDG
WGFGIEHFAKIYSQKIGIKKEVLLKTLWGNYYINMKAKKIMKADQAKGKKPLFVQLILEN
IWSLYDAVLKKDKEKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVC
QKLPSPLDISAERVEKLMCAGSQTFESLPPETQALKAAFMQCGSEDNAPVIIFVSKMFAV
DAKALPQNKPRPLTQEEIAQRRERARRRHAEKLAAAQGQVNSEPKQDGGVPDSDTSPRTE
EPEGDEQQAESLTPTPGPQEENNQECFIAFARVFSGVARRGKKMFVLGPKYSPIEFLRRV
PSGFSAPAEDLPPVPHLACCTLDKLYLLMGRELEDLEEVPPGNVLGIGGLQDSVLKSATL
CSLPSCPPFIPLSFEATPIVRVAIEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHV
LVTAGEVHLQRCLDDLTERFAKIQISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVI
HQTKEDQSRIPEGIQVDSDGLITMTTPNKLATLSVRAMPLPEEVTQILEANSDLIRAMEQ
LTSSISEGKNSEAVHQRTQEKILEFKGKLEQHLTGRKWRNTVDQIWSFGPRKCGPNILVN
KSENFELSVWTGPTSKASKEASRFRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWD
LSRLEEPAASHRQNLEPEEQVEAKHTSNGGEDRELHEDEPPEPGEKRTAQKGDSSLTDCY
GPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGKLVIIPSDPFWVPTTEE
EYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaatagtttggagaagatgatccaactccagaaaaacactgccaacatcagg
aacatctgtgttttggcgcatgtcgaccatggaaaaactacgctggctgactgcctcata
tctagcaatggaatcatctccagccgcctggcaggaaagttacggtacatggacagcaga
gaagatgagcaggtccgcggcatcactatgaaatccagtgccatttcactacactatgcc
gaaggtaatgatgagtacctgattaatctgatagattccccaggacacgtggacttctcc
tcggaggtgtccacagctgtccgcatttgtgacgggtgcatcatcgtggtggatgccgtg
gaaggagtctgtccacagacccaggcagttctgcgacaagcctggctcgaaaacatccgt
cctgtgttggtgattaataagatggaccgcctgatagtggagctgaagttcaccccactg
gaggcctattctcacctcaagaatattttggagcagattaatgcactcacaggaactctt
tttacttctaaagtcctagaagaaagagcagagagagagactgagtgccaggtgaagccc
agctctgcgcaaggcgagcaggtgtatgactggagcaccggcctggaggacacggacgac
tctcatctttacttctctcccgagcagggcaatgtggtgttcaccagcgccatagatggg
tggggcttcggaattgagcattttgccaaaatctatagccaaaaaattggcatcaaaaag
gaggttcttttgaaaaccctgtggggaaattactatatcaacatgaaggctaagaagata
atgaaggccgaccaggccaaagggaagaagcctttgtttgtacagttgatcctggaaaac
atatggagcttgtatgatgctgtcttgaaaaaagacaaagaaaaaattgataaaatagtg
acttctttaggattaaaaattggcgcacgagaggcacgacattcagatcccaaagtccag
atcaatgccatctgcagccagtggcttcccatatctcacgctgttctcgctatggtgtgt
cagaagcttcctagtcctcttgacatctcggccgagagagtggagaagctgatgtgtgct
gggtcacagacctttgaatctctgccgccggaaacgcaagccctgaaagcagcttttatg
cagtgtggaagtgaggacaatgctccggtgattatctttgtttccaaaatgtttgcagtt
gatgccaaggccctgccgcagaacaaaccaaggccacttacccaagaagaaatcgctcag
agacgtgagcgcgcgagacgaagacatgcagagaagcttgcagcggcccagggccaggtg
aactcggagcccaagcaagatgggggtgtccctgacagtgacacaagcccaaggacagag
gagccagaaggtgatgagcagcaggcggaaagcttgacccctacgccagggccccaggag
gaaaataaccaagagtgtttcattgcatttgcacgagtgttcagtggcgtagctcgaaga
ggaaagaaaatgtttgtcctggggcctaaatacagtcctattgagtttttgcgacgggtg
ccctcaggcttctctgctcccgccgaggacctgccccctgtgccccacctggcctgctgt
actctggacaagctgtatctgctgatgggcagggaactggaagacctggaggaagtgcct
ccaggaaatgtgctcgggataggaggactgcaagactccgtgctgaagtctgccacgctg
tgcagcctgccctcctgcccaccgttcatacccctcagcttcgaagccacgccgattgtg
agagttgccattgaaccaaaacacccaagtgagatgcctcagcttgtgaaaggaatgaag
ctgctcaaccaggccgatccctgcgtgcagattttaatccaggagacgggagagcacgtg
ctggtgacggcaggggaagtccacctgcagcggtgcctggacgacttaacggaaaggttt
gcgaagattcagatcagtgtgtctgagcccattattccattcagagagacgatcacaaaa
ccccccaaagttgacatggtcaatgaagaaataggcaaacaacaaaaggttgcagtcatc
catcaaactaaggaagatcagagcagaatccctgaaggcatccaagtggattctgatggc
ctgatcaccatgacaacccccaataaactggccactctcagtgttcgagccatgcccctc
ccagaagaagtcacccagattctggaagcaaacagtgatctgatccgtgcaatggagcag
ctgacatcctctatttctgaaggcaaaaacagcgaggcagtgcaccagagaacccaagag
aaaattctggaattcaaagggaagctggagcaacacctaacaggacggaaatggaggaac
acggtggaccaaatctggtctttcggccccagaaaatgtgggcccaacatcctagtcaat
aaaagcgaaaacttcgagctctcggtctggaccggccccaccagcaaagcttcaaaagag
gccagcagattccgagatttgggcaatagcattgtgagcggcttccagttagcaaccttg
tcggggcccatgtgtgaggagcccctcatgggtgtgtgctttgtcctggagaaatgggac
ctgagcagacttgaggaaccagccgcaagtcacagacagaatctagagccagaggagcag
gtggaagccaaacacacctccaatggaggtgaagaccgagagctgcacgaggatgaaccc
ccagagcccggtgagaagaggactgcccagaaaggagactcgtccctcacagactgctat
gggcccttctcaggtcagctgattgctaccatgaaggaagcgtgccgctacgccctgcag
gtgaaaccacagcgcctcatggcagccatgtacacctgcgacatcatggccaccagtgac
gttcttggtaagttggtgatcattcccagtgaccccttctgggtgccgaccactgaggag
gagtacctgcactttggggagaaggccgactcggagaaccaggcccggaagtacatgaat
gcggtgcggaagcggaagggcctgtatgtggaagagaagatcgtggagcacgcggaaaag
cagagaacgctcagcaagaacaagtag
DBGET
integrated database retrieval system
