Ochotona princeps (American pika): 101522049
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Entry
101522049 CDS
T07609
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101522049 (TMC5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101522049 (TMC5)
03037 Cilium and associated proteins [BR:
opi03037
]
101522049 (TMC5)
Transporters [BR:
opi02000
]
Other transporters
Pores ion channels [TC:
1
]
101522049 (TMC5)
Cilium and associated proteins [BR:
opi03037
]
Other cilia and associated proteins
Stereociliary proteins
101522049 (TMC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
101522049
NCBI-ProteinID:
XP_012782910
LinkDB
All DBs
Position
6:complement(15734403..15780798)
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AA seq
841 aa
AA seq
DB search
MSAYYSNRSYEEDSDYPPYAGSQNYRRGFSNAQDSPGFQDPPSILDYPSSRNTSFSAGSR
ASPEYPRTLPEPDYIASENSPYYPDSPRGSGYGGAQRNPNVIGSRNNGNYEGSRTIPDYL
DSLGEPDYPGAQGTFSPPGPRASSNLPGSRRNLHYARSRVSPYTESLLGQPDYPGAETEL
RSSHFFGEPDSHGAENFQNSPDFWGNPDYPGAEDGHHYGSSESLEASRRGNGPLGILGGN
HEDYPETVEMGAMLSDDQVNDIAVEVENVPIGVQSHSSKNQISPERAPVKPSFSVVSSAS
DADGLDPHLCGSGNDRKGQHLKRFSACSHESVSQMLPGPECLGLDGPCASHETIQGQKLI
ASLIPMTSRDRIKTIRNQPRTMDEKRNLRKTVDKEKSKQSNRVLEFNCCAQCLNSLSLGY
RRSKSNLSELLNSISLWQKTLKVIGGKFGTSVLSYFNFLRWLLKFNIFSFILNFSFLTIP
QFTVAEKNTLQFTGLEFLTGAGYFKDTVLYYGYYTNSTIQHRHSGVSYNMPLAYIFTIGA
CLITCFFSLLFSMAKYFRNNFINPHIYSRGIAKLIFCWDFTVTHEKAVKLRQKNLSTEIR
ENLSEIRQENARFTFHQQLTRFSAHVVAWVVSTGMAVACCVAVYYLAEYNSEFLKTHRNP
WAVLLLPFVVSCINLVVPRFYSMFRLVERYEMPRHEVYTLLIRNIFLKMSIIGILCYYWL
NIVALSGEECWETLIGQEIYRLLLMDFVFSVADSLLGEFLRRIIGMRIYAQTLVWIGIFF
CPLLPFIQMITLFIMFYIKNISLMMNFQPPSKAWRASQMMTLFILLLFFPSFTGEAGGSQ
T
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctactacagcaatagaagctatgaggaggattcagattaccctccctatgcg
ggctctcagaactacaggagggggttttcaaacgctcaggattctccaggttttcaagat
cctccgagtattttggattatcccagttccaggaatacttccttctctgcaggttccaga
gcaagtccagagtatcctagaactctgcctgagcccgattacattgcctctgagaacagt
ccgtactacccagactcgcctcgagggtcagggtacggtggagctcagcgaaatcccaat
gtgataggttccagaaacaatggaaactacgaaggctctagaacaatcccagattatctt
gactccctgggagagccggactaccctggggcccagggtaccttcagccctccaggcccc
agagccagttccaaccttccaggatccagaaggaacttacactatgctcgttccagagtc
agcccatacacagaatcgcttctgggacagcctgattatccaggggctgagactgaactc
cgttcttcacacttcttcggggaaccagactctcatggtgctgagaatttccagaactct
ccagacttttggggaaaccctgattacccaggtgctgaagatggtcatcattatggctct
tctgaaagcctggaagcaagcagacgtggtaatggccccttgggcattcttggtggaaat
catgaagattatcctgaaactgttgaaatgggagcaatgttatcggatgaccaagtgaat
gacattgccgtagaggtggaaaatgttcccattggggtccagagccattcatccaaaaat
caaatttcaccagaaagggccccggtcaagcccagcttcagcgtggtttcctcagcatct
gatgccgacgggctggacccacatctgtgtggcagcgggaatgacagaaagggccagcac
ttaaagcggttctcagcatgttcacatgaatccgtgtctcagatgctgcctggcccagaa
tgcctgggcttggatggtccttgtgcttcccacgaaaccattcaaggacaaaagttgatt
gcgtctctgattcccatgacttctagagacagaattaaaaccattaggaaccagccacgg
actatggatgagaagaggaacctgaggaaaacagttgacaaggagaagagtaagcaatcc
aatcgtgtccttgagttcaattgctgtgcacagtgtctgaactccctttctctgggttac
cggagatccaagagcaacctgtcggagctcctcaactccatcagcttgtggcagaagaca
ctcaaggtcattggaggcaaattcggaacgagcgtcctatcctatttcaactttctgcgg
tggctcttgaagttcaacatcttctccttcatattgaacttcagtttcctcacgatccct
cagttcactgtggctgagaagaacaccctgcaattcactgggctggagttcctaacggga
gcgggttattttaaggacacggtgctgtactacggctattacaccaattccaccatccag
caccggcacagcggggtctcctacaacatgccgctggcctacatcttcaccattggggcc
tgtttgatcacctgcttcttcagcttgctcttcagcatggccaagtatttccggaacaac
ttcatcaaccctcacatttactccagaggcatcgcaaagctcatcttttgctgggacttc
accgtcactcacgaaaaggccgtcaagcttaggcagaagaatctcagtacggagatccgg
gagaacctgtctgagatccgacaggagaacgccagattcacgtttcaccagcagctgact
cgcttctctgctcacgtggtcgcctgggtggtctccactggcatggccgtggcctgctgc
gtggccgtctactacctggccgagtacaactcggagttcctgaagacgcacaggaacccc
tgggcagtactgctgctgccattcgtggtgtcctgcatcaacctggttgtgccacgcttc
tactccatgttcaggctggtggagcgctatgagatgccacggcatgaggtctacactctc
ctcatccgaaacatcttcctgaaaatgtccatcattggaattctttgttactattggctc
aacattgtggccctgtctggagaggagtgttgggagaccctcatcggccaggaaatctac
cggctccttctgatggatttcgtgttctctgtagcagattccttgcttggagagtttcta
aggagaatcatcggaatgcggatctatgcacaaactctggtgtggattggaatcttcttc
tgccctctgctgccctttatccaaatgattactcttttcatcatgttttacatcaaaaat
atcagcctaatgatgaatttccagcctcccagcaaagcctggcgggcctcacagatgatg
accctcttcatcttgttactctttttcccatccttcactggagaggcaggaggcagtcag
acctga
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integrated database retrieval system
