Ochotona princeps (American pika): 101522100
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Entry
101522100 CDS
T07609
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
opi
Ochotona princeps (American pika)
Pathway
opi05014
Amyotrophic lateral sclerosis
opi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101522100 (NEFM)
05022 Pathways of neurodegeneration - multiple diseases
101522100 (NEFM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101522100 (NEFM)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
101522100 (NEFM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
101522100
NCBI-ProteinID:
XP_004579119
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Position
2A:complement(36841658..36846954)
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AA seq
864 aa
AA seq
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MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSTLAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHY
LEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEED
IHRLKERFEEEARLRDDTEAAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHEEE
VADLLAQIQASHITVERKDYLKTDISSALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTE
AAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQD
TIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITG
PLYMHRQPSVTISSKIQTKVEAPKLRVQHKFVEEIIEETKVEDEKSEMEEALTAIAEELA
VSTKEEEKEEEAEEKEEEQEAEEEEVVAAKKSPVKATTPEMKEEEEGEKEEEGQEEEEEE
EDEGAKSDQAEEGGSEKEGSSEKDEGEQEEGEAEAEGEGEAEEAETKDEKKTEEKPEEVA
AKEEPATEAKVGKPEKAKSPVPKSPEEEVKPKAEAREGKGEQKEEEEKAEAEKKEAAKES
PKEEKVEKKEEKPKDVPEKKKAGSPVKEEATEEAVPSTKPTKVSVEKEAKEEKPPQQQEK
EKEKAGEEGGSEEEGGDQGSKEARKEDIAVNGEVEGKEEEEEQETKEKGSGREEEKGVVT
NGLDLSPADEKKGDKSEEKVMVTKKVEKITTEGVDGATKYITKSVTVTQKVEEHEETFEE
KLVSTKKVEKVTSHAIVKEVAQSD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgctggactcgctgggcaacccgtccgcctaccggcgggtcaccgagacc
cgctcgagcttcagccgcgtcagcggctctccgtccagcggcttccgctcgcagtcgtgg
tcccgcggctcgcccagcaccgtgtcctcctcctacaagcgcagcaccctcgccccgcgc
ctcgcctacagctcggccatgctcagctccgccgagagcagcctcgacttcagccagtcc
tcgtcgctgctcaacggcggcggctccggcggcgactacaagctgtcccgttccaacgag
aaggagcagctgcaggggctgaacgaccgcttcgccggctacatcgagaaagttcactac
ctggagcaacagaacaaggagatcgaggcggagatccaggcgctgcggcagaagcaggcc
tcgcacgcccagctgggcgacgcgtacgaccaggagatccgcgagctgcgcgccacgctc
gagatggtgaaccacgagaaggctcaggtgcagctggactcggaccacctggaggaagac
atccaccggctcaaggagcgcttcgaggaggaggctcggctgcgggacgacacggaggcg
gccatccgcgcgctgcgcaaagacatcgaggagtcgtcgctggtcaaggtggagctggac
aagaaggtgcagtcgctgcaggatgaggtggccttcctgcggagcaaccacgaggaggag
gtggcggacctgctggcccagatccaggcgtcgcacatcacggtagagcgcaaagactac
ctgaagacggacatctcgtcggcgctgaaggagatccgctcccagctcgagtgccactcg
gatcagaacatgcaccaggccgaagagtggtttaaatgccgctacgccaagctcaccgag
gcggccgagcagaacaaggaggccatccgctccgccaaggaagagattgccgaataccgg
cgccagctgcagtccaagagcatcgagctcgagtcggtacgcggcaccaaggagtccctg
gagcggcagctcagcgacatcgaggagcgccacaaccacgacctcagcagctaccaggac
accattcagcagctggaaaatgagcttcggggaacgaagtgggaaatggcccgtcacttg
agagaataccaggatctcctcaacgtcaagatggccctggatatagagatcgccgcctac
aggaaactcctggaaggcgaagagaccagattcagcacgttctcaggaagcatcactggg
cctctgtatatgcaccgacagccctccgtcaccatttccagtaagattcagaccaaggtg
gaagcgcccaagctcagagtccaacacaagtttgtcgaggagatcattgaggaaaccaaa
gtggaggatgagaagtcagaaatggaagaagcgctgacagccattgccgaggagctggct
gtgtccacgaaggaggaagaaaaggaagaagaggccgaagaaaaggaggaggagcaggag
gccgaggaagaagaagttgtagctgccaaaaagtctccagtgaaggccaccaccccggag
atgaaagaggaggaagaaggcgaaaaggaagaagaaggccaggaggaagaagaagaggaa
gaagacgagggtgctaagtccgaccaagccgaagaagggggatccgagaaggaaggctcc
agtgagaaggatgaaggcgaacaggaagaaggagaggccgaggctgaaggtgaaggtgag
gcagaagaagccgagaccaaggatgaaaagaagacagaggagaagcctgaagaagtggcc
gccaaggaggagccagcgacagaagccaaggtgggaaagccagaaaaagccaagtccccc
gtgcccaaatcgcccgaggaagaagtgaagccaaaagccgaagccagggaaggaaagggg
gaacagaaggaagaagaagagaaagctgaggcagaaaagaaagaagcagccaaggagtct
cctaaggaagagaaggtagagaaaaaggaggagaagccaaaagatgtgcccgagaagaag
aaggctggatctccggtaaaggaggaagccacggaagaggctgtcccctccaccaaaccc
acgaaggtgagtgtggagaaagaggccaaggaagagaagccgccgcagcagcaggagaag
gagaaggagaaagcaggagaggagggaggcagtgaggaggaagggggtgatcagggctcc
aaggaagccaggaaggaagacatagctgtcaacggagaggtggaagggaaagaggaggag
gaagagcaggagacgaaggagaagggcagcgggcgcgaagaggagaaaggcgtcgtcacc
aatgggttagacttgagcccagccgatgagaagaaaggtgacaaaagtgaggagaaagta
atggtgaccaaaaaggtagaaaagatcaccaccgagggggtagatggtgctaccaaatac
atcactaagtccgtcacggtcactcaaaaggtcgaagagcatgaagagacctttgaggag
aagctagtgtcgactaaaaaggtagagaaagtcacctcacacgccattgtcaaggaagtc
gcccagagtgactaa
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