Ochotona princeps (American pika): 101522119
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Entry
101522119 CDS
T07609
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04137
Mitophagy - animal
opi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101522119 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101522119 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101522119 (AMFR)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
101522119 (AMFR)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101522119 (AMFR)
Multi subunit type E3
ERAD complex
101522119 (AMFR)
LMBR1L-GP78-UBAC2 complex
101522119 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
101522119
NCBI-ProteinID:
XP_036348513
LinkDB
All DBs
Position
5:complement(28149895..28221638)
Genome browser
AA seq
548 aa
AA seq
DB search
MLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCITGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLVSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHQ
GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRSDSMRPALT
SPVERPNSDLEEGEVSTQTERVPLDLGPHLEETLDICEADTEPGEVEDFEARGSRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEEDTAAESFLAPEVPSSDPVALRRSMLAAAAER
RLQKQQPS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggctaaacttatccagtgtattgtgtttggccctcttcgagtgagtgagaga
cagcacctcaaggacaagttttggaattttattttctacaagttcattttcatctttggt
gtgctgaatgtccagacagtggaagaagtggtcatgtggtgcctctggtttgccggactt
gtatttctgcatctgatggttcagctctgcaaggaccgatttgaatatctttctttttct
cccacaacaccgatgagcagccatggccgagtcctgtctctgttgattgctatgctgctt
tcatgttgtgggctggctgtcgtctgctgcatcaccggctatacccatgggatgcatacc
ttggccttcatggctgcagagtctcttcttgtgacagtgaggaccgctcatgtgatttta
cgctatgttattcacctctgggacctcaaccacgaggggacctgggaaggaaagggaacg
tatgtctactacacagattttgtcatggagctcacactcgtgtccctggacctcatgcac
cacattcacatgctgttatttggtaacatctggttgtccatggccagcctggtcatcttt
atgcagctgcgttacctgtttcatgaggttcagcgtcgaattcgtcggcacaagaactac
ctgagggtcgttggaaacatggaagccagatttgcagttgcaactcccgaggaactggct
gtcaacaatgacgattgtgccatctgctgggactccatgcaggctgccaggaaactgccc
tgtggtcatcttttccacaattcctgtctccgttcctggctagaacaagacacctcctgt
ccaacatgcagaatgtctctcaatatcgctgacaacaatcgtgtcagggaagaccatcaa
ggcgagaacctggatgagaatttggtgcctgtagcagcagctgaaggcagacctcgctta
aaccagcacaatcatttcttccacttcgatggttcccggattgcgagctggctgccgagc
ttctcagttgaagtgatgcacaccaccaacattctcggcattgcgcaggcaagcaactcg
cagctgaacgccatggctcatcagatccaagagatgtttccccaggttccgtatcacctg
gtgctgcaggacctccagctgacacgctctgttgaaataacaacagacaacattctagaa
ggacggattcaagtcccttttccgacccagcggtcggacagcatgcggcctgcgttgacc
agtcctgtggagagaccaaacagtgacctggaggagggcgaagtttccactcagacagaa
cgagtgcccctggaccttggtcctcatctggaggagaccttggacatctgtgaggctgac
acagagcctggcgaggtggaggactttgaggctcgtgggagccgcttttccaagtcggcc
gacgagagacagcgcatgttagtgcagcgcaaggacgacctcctccagcaggctcggaag
cgcttcctgaacaaaagctctgaagaggatacagctgcagagagctttctggcccctgaa
gtcccgtcctctgaccctgtggccctgcggcggagtatgctggccgctgccgccgagcga
aggctccagaagcagcagccctcctag
DBGET
integrated database retrieval system