KEGG   Ochotona princeps (American pika): 101522119
Entry
101522119         CDS       T07609                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
opi  Ochotona princeps (American pika)
Pathway
opi04137  Mitophagy - animal
opi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101522119 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    101522119 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:opi04121]
    101522119 (AMFR)
Enzymes [BR:opi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     101522119 (AMFR)
Ubiquitin system [BR:opi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101522119 (AMFR)
  Multi subunit type E3
   ERAD complex
    101522119 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    101522119 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-ANAPC11 zf-rbx1 zf-RING_UBOX zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 zf_RING_Vps8 zf-RING_Vps41
Other DBs
NCBI-GeneID: 101522119
NCBI-ProteinID: XP_036348513
LinkDB
Position
5:complement(28149895..28221638)
AA seq 548 aa
MLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCITGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLVSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHQ
GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRSDSMRPALT
SPVERPNSDLEEGEVSTQTERVPLDLGPHLEETLDICEADTEPGEVEDFEARGSRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEEDTAAESFLAPEVPSSDPVALRRSMLAAAAER
RLQKQQPS
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgttggtggctaaacttatccagtgtattgtgtttggccctcttcgagtgagtgagaga
cagcacctcaaggacaagttttggaattttattttctacaagttcattttcatctttggt
gtgctgaatgtccagacagtggaagaagtggtcatgtggtgcctctggtttgccggactt
gtatttctgcatctgatggttcagctctgcaaggaccgatttgaatatctttctttttct
cccacaacaccgatgagcagccatggccgagtcctgtctctgttgattgctatgctgctt
tcatgttgtgggctggctgtcgtctgctgcatcaccggctatacccatgggatgcatacc
ttggccttcatggctgcagagtctcttcttgtgacagtgaggaccgctcatgtgatttta
cgctatgttattcacctctgggacctcaaccacgaggggacctgggaaggaaagggaacg
tatgtctactacacagattttgtcatggagctcacactcgtgtccctggacctcatgcac
cacattcacatgctgttatttggtaacatctggttgtccatggccagcctggtcatcttt
atgcagctgcgttacctgtttcatgaggttcagcgtcgaattcgtcggcacaagaactac
ctgagggtcgttggaaacatggaagccagatttgcagttgcaactcccgaggaactggct
gtcaacaatgacgattgtgccatctgctgggactccatgcaggctgccaggaaactgccc
tgtggtcatcttttccacaattcctgtctccgttcctggctagaacaagacacctcctgt
ccaacatgcagaatgtctctcaatatcgctgacaacaatcgtgtcagggaagaccatcaa
ggcgagaacctggatgagaatttggtgcctgtagcagcagctgaaggcagacctcgctta
aaccagcacaatcatttcttccacttcgatggttcccggattgcgagctggctgccgagc
ttctcagttgaagtgatgcacaccaccaacattctcggcattgcgcaggcaagcaactcg
cagctgaacgccatggctcatcagatccaagagatgtttccccaggttccgtatcacctg
gtgctgcaggacctccagctgacacgctctgttgaaataacaacagacaacattctagaa
ggacggattcaagtcccttttccgacccagcggtcggacagcatgcggcctgcgttgacc
agtcctgtggagagaccaaacagtgacctggaggagggcgaagtttccactcagacagaa
cgagtgcccctggaccttggtcctcatctggaggagaccttggacatctgtgaggctgac
acagagcctggcgaggtggaggactttgaggctcgtgggagccgcttttccaagtcggcc
gacgagagacagcgcatgttagtgcagcgcaaggacgacctcctccagcaggctcggaag
cgcttcctgaacaaaagctctgaagaggatacagctgcagagagctttctggcccctgaa
gtcccgtcctctgaccctgtggccctgcggcggagtatgctggccgctgccgccgagcga
aggctccagaagcagcagccctcctag

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