Ochotona princeps (American pika): 101522198
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Entry
101522198 CDS
T07609
Name
(RefSeq) guanylate-binding protein 4
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101522198
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Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
DYN_lid
Motif
Other DBs
NCBI-GeneID:
101522198
NCBI-ProteinID:
XP_004582245
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Position
13:78730196..78755174
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AA seq
619 aa
AA seq
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MEAPICLVENCEEQLTVNPKALEILHKISQPVVAVAIVGLYRTGKSYLLNRLAGRNHGFP
LGSTVQSQTKGIWMWCVPHPSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLSSTL
VYNSLGTINHQALEQLHYVTELTQLIRARSSSVSDEVEDSTDFVSFFPDFVWTVRDFTLE
LKLNGSPITEDEYLENALKLIPGKNPRIENSNLPRTCIRYFFPKRKCFVFDRPTSDKNLL
AHIEEVPEDQLESNFKKQSKQFCNYIFTCGKTKTLRHGIIVTGNRLGCLVEMYVNAINSG
AVPCLENAVTTLAERENAAAVEKAAAHYMAQMAERVMLPSDTLQELLDVHTVCEKEAIEV
FMEHSFKDENQNFQKNLVEAIEKMKEDFLLQNEDASVKYSQAELTRLSKSLMENISGGTF
SVPGGHKLYLEARKKVEKEYALVPRKGVKAKEVLQSFLQSQAATEKSILQADQALTDGQK
ALAAEEAKREAAEKERELLRQKEKEQQQKMEAQEKSFRENIAQLQEKMEREKQEILSEQE
NMLKHKLEEQERMLKEGFKKNANGLKEQIHQLNQEIEKTKNRSSGWSGFLNTLGNIFSLI
PTLPTVLLGMGLRNLGSKN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccccatctgtctagtggaaaattgcgaggagcagctgacagtgaatccaaaa
gcattagaaattcttcacaagatatctcaacctgtggtggcagtggcaattgtgggactg
tatcgcacaggaaaatcttacctcctgaatcgcctggcaggaaggaaccatggcttccct
ctgggatccacggtgcaatctcaaaccaagggcatttggatgtggtgcgtgccccacccc
tccaagccaaatcacactttggtccttctggatactgaaggcctgggtgatgtggaaaag
ggagaccctaagaatgactcgtggatctttgccctggctgtgctcctgagcagcaccttg
gtctacaacagcctgggcaccatcaaccaccaggccctggagcagctgcattatgtgact
gaactcactcagttaatcagggcacgatcttcctccgtatctgatgaagtagaagactcc
acagattttgtgagtttctttccagattttgtttggactgtgcgggatttcaccttggag
ctgaagttaaatggaagccccatcacagaagatgagtacctggagaatgccctgaagctg
attccaggaaagaaccctagaattgaaaattccaacttgcctagaacatgtatcagatat
ttctttccaaaacgtaagtgctttgtctttgaccggcccacaagtgataaaaatctacta
gcacatattgaagaagtgccagaagaccaattagaatccaattttaaaaagcagtcaaaa
cagttctgcaactatatcttcacatgtgggaagaccaagaccctgagacatggaatcatt
gtcactggaaataggctgggctgtctggtagagatgtacgtgaatgccatcaacagtgga
gcagtgccttgcctggagaacgcagtgacaactctggctgaacgtgaaaacgctgcagct
gtggagaaggcagccgcccactacatggcccagatggctgagcgagtgatgctcccctca
gacacactccaggagctgctggacgtgcacacagtctgtgagaaggaagccattgaagta
ttcatggagcactccttcaaggatgagaaccagaactttcagaagaatcttgtggaagcc
atagaaaagatgaaggaagatttcttgctgcagaatgaagatgcttctgtcaaatatagc
caggctgagcttacacggctttcaaagtctttgatggaaaatatttcaggaggaacattc
tctgttcctggagggcacaaactctacttagaagcaaggaaaaaggttgaaaaggagtat
gcgctggtgcccagaaaaggagtgaaggcaaaagaggtgcttcagagttttctgcagtca
caggcagcaacagagaaatccatcctgcaggcagaccaagcactcactgatggacagaag
gccttagcagccgaggaggccaagagggaagcagctgagaaggaacgggaactgctaaga
cagaaggagaaggagcaacagcaaaagatggaggctcaagagaaaagtttccgagaaaac
attgctcagctacaggagaaaatggagcgggaaaagcaagagatcttgagtgagcaggaa
aacatgttgaagcacaagttagaggaacaagaaagaatgcttaaagaaggattcaagaag
aatgctaatggcttaaaggaacagatacatcaactgaatcaagagattgaaaaaacgaag
aatcgaagttcagggtggtcagggttcttaaatacattgggcaacatattctccctgata
cccactttacctactgtgctacttggtatggggttgagaaatcttggttcgaaaaattag
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