Ochotona princeps (American pika): 101522226
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Entry
101522226 CDS
T07609
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101522226 (DENND4B)
Membrane trafficking [BR:
opi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101522226 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
SPA
MAS20
Motif
Other DBs
NCBI-GeneID:
101522226
NCBI-ProteinID:
XP_004589001
LinkDB
All DBs
Position
13:complement(113439177..113450256)
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AA seq
1500 aa
AA seq
DB search
MEADAVSEGGAMAEERPPRLVDYFVVAGLAGNGAPMPEDARVPDPSGPLRPCRPAEPITD
VAVIARALGEEVPQGYTCIQASAGGHPLELSAGLLGGTQPVICYRRGRDKPPLVELGVLY
EGKERPKPGFQVLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEGAGLHALGITDLCLVLP
SKGEGTPHTYCRLPRNLNPGMWGPAVYLCYKVGLAKGNTLVYEAELLGRYPEEDNEAFPL
PESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYGAALQFYEAFPRARLSE
RQARALGLLSAVERGRALGGRAVRSRRAIAVLSRWPAFPAFRAFLTFLYRYSVSGPHRLP
LEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPEL
AVTLLLAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLSAPV
PFIVGIHSSYFDLHDPPADVICVDLDTNTLFQTEEKKPLTPRTLPRKPYKVLLATLTNLY
QQLDQTYTGPEQEASLEFLLTDYEAVCGRRARLEREVQGAFLRFMACLLKGYRDFLRPLT
HTSEGARDVDNLFYLQGFLKSRERSSHKLYSQLLHTQMFSQFIEECSFGSARHAALEFFD
SCVDKVHVEQERPEPTPLVELEELSGSELTVFITPPEEPPVTDSSEPTPQFCYDGFPELR
AELFESPQEQPGALPVPGPSRSAPSSPAPRRTKQEMKVAQRMAQKLAAVPELWARCLLGH
CYGLWFLCLPAYVRSAPNRVRALHTAYHVLRDMESRKAVLPDEVCYRVLMQLCSHYGQPV
LSVRVMLEMRRMGIVPNTITYGYYNKAMLESKWPSGTPGGRLRWAKLRNVVLGAAQFRQP
LRERRQREQQQQQQEEEAGSSRTEPCLERPSPSRPLQRQTTWAGRSLRDPASPVGRLVKS
GSLGSARGAQPTVETGVAHMIEALGVLEPRGSPVPWHDGSLSDLSLTGEEPVPSSSPSGS
GSALSAQSTEALEGLNGRGPKAGGRQEEAGTPRRSLGARLQQLLTPSRRAPASRIPPPEQ
PTDLPPPARRSPMDSLLRPRERPGSTASESSASLGSEWDLSESSLSSLSLRHSSERLSDA
PGSLQPPSLEILLSSCSLCRACDSLVYDEDIMAGWAPDDSNLNTTCPFCACPFVPLLSVQ
TLDSRPSAASPKPAPAGASDSKDAPVPGGPGPVLSDRRLCLALDEPQLCNGHLVGTSRRV
DSGAWAYLSPLVLRKELESLVENEGSEVLALPELPAAHPIIFWNLLWYFQRLGLPSILPS
LLLAPCDGPPPGQVSQAPSPRLTPDPASVQVRLLWDILTPDPDSCPPLYVLWRVHSQIPQ
RVMWPGPVPASLSLALLESVLRYVGLNEVHKAVGLLLETLGSPPSGLHLQRGIYREILFL
TMAAMGKDHMDIGAFDKKYKSAFNKLASSMGKEELRQRRAQMPTAKAIDCRKCFGAPLEC
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatgcggtgagtgaggggggggccatggcagaggagcggcccccccggctg
gtggattacttcgtggttgctgggcttgctggcaacggagcccccatgcccgaggatgca
cgggttcctgaccccagcggtccgctgcgcccctgccggcctgcagagcccatcacagat
gtggccgtcattgccagggccctgggcgaggaggtgccccagggctacacatgcatccag
gcttcagctgggggccatcccttggaactcagtgctgggctgctgggaggaacacagcct
gtcatctgctaccgcaggggccgtgacaagccccccctcgtggagctgggggttttgtat
gagggcaaggagcgtcccaagcccggcttccaagtgctggacacaacaccctatagtcac
tccgctaacctggcccctccaggccctgggcacccccgcacctacctcacataccggcgg
gcagcagaaggggcaggactgcatgccctgggcatcactgacctctgcctggtgctgccc
agcaagggtgaaggcactccccatacttactgccggttgccacgcaacctcaaccctggc
atgtggggcccagctgtgtacctgtgctacaaggtgggcttggctaagggcaacacgctg
gtgtatgaggcagaactgctgggccgctatccggaggaagacaatgaggcattcccgcta
cccgagtccgtgcctgtcttctgcctccccatgggggccactatcgagtgctggcccgcc
cagaccaagtatcccgtgccggtcttctccacctttgtgctgacgggtgccgctggcgat
aaggtgtatggtgccgccctgcagttctacgaagcattccccagggcccggctgtcggag
cgacaggcacgggccctgggcctgctgagtgccgtggagcggggccgggcactgggtggc
cgagcagtgcgcagccggcgagcaatcgctgtgctgtcacgctggcctgccttccctgcc
ttccgggccttcctcaccttcctttaccgctactctgtctcgggccctcaccgcctgccc
ttggaagcgcacatctcccacttcattcacaacgtccccttcccttccccacagagaccc
cgcatccttgtgcagatgtctccctacgacaacctgctcctctgtcagcctgtatcttca
cccctgccactcagcggtgccagcttcctgcagctgctgcagagcctgggccccgagctg
gctgtcacactgctgctggctgtgctcacggagcacaaactgctggtgcactcgctgcgg
ccagacctgctcaccagtgtctgtgaggctctcgtctcgatgatcttcccactgcattgg
cagtgcccctacattccgctgtgcccactggtactggcggacgtgctgagcgcccccgtg
cccttcatcgtgggcatccactccagctattttgacctgcacgatccccctgccgatgtc
atctgtgttgatctggacaccaacacactcttccagacggaggagaagaagcccctgacc
ccccggaccctgcctcgcaaaccctacaaggtgctgctggccacactaactaacctgtac
cagcagctggaccagacatacactggccccgagcaggaggcctccctggagttcctgctg
acggactatgaggcagtgtgcggccgccgggcccgcctggaacgggaggtccagggcgcc
ttcctccgcttcatggcttgtttgctcaagggttaccgtgacttcctacggccactcacc
cacacctccgagggcgcccgcgacgtggacaaccttttctatcttcagggcttcctcaag
tcccgggagcgctccagccacaagctgtactcccagctgctacacacacaaatgttctcc
cagttcattgaggagtgctcttttggctctgctcggcatgctgccctggagttcttcgac
tcttgtgtggacaaggtgcacgtggagcaggagaggcctgagcccactccactggtggag
ctggaagagctatcaggaagcgagcttactgtcttcatcacgcctcccgaggagcccccg
gtcacagacagcagtgagcccaccccccagttctgctacgatggcttcccagaattacgg
gctgagctgtttgaatctccccaggaacaacctggggcattgcccgtgcctggcccatcc
cgtagtgcccccagcagccctgcccctcgtcgtaccaaacaggagatgaaagtggcgcag
cggatggcacagaagctagcggcagtgcctgagctttgggcccgctgcctgctggggcac
tgctacgggctgtggttcctgtgtctgcctgcctacgtgcggtcagcacccaaccgtgtg
cgggcactgcacacagcctaccacgtgctgcgggacatggagagccgcaaagcggtgctc
ccggatgaggtgtgttaccgggtactgatgcaactctgctcacactacgggcagcctgtg
ttgtctgtgcgggtcatgctagagatgcggcgcatgggcattgtgcccaacaccatcacc
tatggctactacaacaaggccatgctggagagcaagtggccgtctggcacaccaggtggg
cgcctgcgctgggccaagctccgcaacgtcgtcctgggggctgctcagttccgccagccc
ctgagagaacggcggcagcgagagcagcagcagcagcagcaggaggaggaggcaggcagt
tcccggacagagccctgtctggagcgcccctcccccagccgcccacttcagcgccagact
acttgggctgggcgaagtctgagggacccagcctcccccgtggggcgcctggtgaagagc
gggagcctgggcagtgcccgaggggcgcagcccactgtggagaccggcgtggcccacatg
atagaggccttgggggtgctagaaccccggggctcccccgtgccctggcatgacggaagc
ctctctgacctgagtctcaccggggaggagccggttcccagcagcagcccgagtggctcg
ggttcagccctgagtgcacagtccactgaggccctggaagggctgaacggacgtgggccc
aaggctggggggcgtcaggaggaggctggcacgccacggcgaagcctgggtgcccgtctc
cagcagctgctcacaccctcccgtcgtgcccctgcctcccgcatccccccgccggagcag
cccacagacctgcctcccccagcccgccgcagccccatggacagccttctgcggccccgg
gagcggcctggatccactgcttctgagagctcggcctctctgggcagcgagtgggacctc
tcagaatcttctctcagcagcctgagcctccgccactcctccgaacgcctcagtgacgcc
cccggctctttgcagccgccctccctggagattctgctgtccagctgctccttgtgccgt
gcctgtgactcactggtgtacgatgaagacatcatggctggctgggcaccggatgactcc
aacctcaacacaacctgccccttttgtgcctgtccatttgtgcccctgctcagtgtccag
accctcgattcccgacccagtgctgccagccccaagcctgcccctgctggtgccagtgac
agcaaagatgcccctgtccctgggggtcctggccccgtgctcagtgaccgcaggctctgt
cttgccctggatgagccccagctctgtaatgggcatctggtgggtacctcccgacgagtg
gatagtggggcatgggcatacctgagcccgctggtgctgcgcaaggagctggagtcacta
gtggagaacgagggcagtgaggtgctggcgttgcctgagctacctgctgcccaccctatc
atcttctggaaccttctgtggtattttcaacggctgggcctgcccagtattctgcctagc
ctgctgttggccccctgtgatgggcccccacctggccaggtcagccaggccccatctccc
cggctgacccctgacccagcctctgtgcaggtgcgcttgctgtgggatatcctgacccct
gaccccgatagctgtccacctctctatgtgctctggagggttcacagccagatcccccag
agggttatgtggccaggcccagtccctgcctcccttagcttggcattgttggagtcggtg
ctgcgctatgttggactcaatgaggtgcataaggcagtggggctcctgctggaaacacta
ggatcccctcccagcggcctgcacctgcagaggggcatctaccgtgagattttattcctg
acaatggctgctatgggcaaggaccacatggacataggggccttcgacaagaagtacaag
tcggctttcaacaagctggccagcagcatgggcaaggaggagctgaggcagcgtcgggcg
cagatgcccacagccaaggccattgactgccgaaagtgttttggagcacctctggaatgc
tag
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