Ochotona princeps (American pika): 101522634
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Entry
101522634 CDS
T07609
Symbol
UTP15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog isoform X1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101522634 (UTP15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101522634 (UTP15)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101522634 (UTP15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_DCAF4
PEP5_VPS11_N
WDR54
Beta-prop_IFT122_2nd
KNTC1_N
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
101522634
NCBI-ProteinID:
XP_004586221
LinkDB
All DBs
Position
11A:complement(22387770..22403928)
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AA seq
518 aa
AA seq
DB search
MAGYKPVAIQSYPVLGEKVTQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYHYAVTASS
RIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEG
HSKAVHTVDFTADKYHVMSGADDCAVKLWDIPNAQEILTFREHSDYVRCGCASKLNPDLF
VTGSYDHTVKVFDARSSGSVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQL
LVSLKNHHKTVTCLCLSSNGQRLLSGSLDRKVKVYSTTSYQVVHSFDYAASILSVALSHE
DETIVVGMTNGILSVKHRKSEAKKESLPKGRRPAYRTFVKGKSYMKQRDDVAINRPAKKY
LELYDRDLKHFRISKALDRVLEPECTLKTPEVTVSIIKELSRRGVLANALAGRDEKEITR
VLNFLIRNLPQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLVLQGLVEKEIDYQREL
LETLGMMDMLFATMTRKESTSVLDHSSDGFLDNKKTES
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctggctataagcctgtcgccattcagagctatcctgtactcggagaaaaagtcact
caggacaccttgtactggaacaactataagacccctgttcagattaaggaatttggtgcc
gtgtcgaaagtagacttttctccgcagccaccttatcattacgctgtcacagcttcctcc
agaattcacatttatggccgatactcgcaagaacccgtgaaaaccttttcccgatttaaa
gacacagcctactgtgcgacttttcggcaggatggtagattgctcgtggctggcagtgag
gacggtggggtgcagctttttgatatcagtggaagggctcccctcaggcagtttgaaggc
cactcaaaagcagttcacacggtggatttcacggctgacaagtaccatgtgatgtctgga
gcagacgactgtgcggttaagttatgggacattccgaatgcccaggaaatcttgacattc
agagaacattctgattatgtgaggtgtggctgtgccagcaagctgaacccagatctcttt
gtaacagggtcctacgatcacactgtgaaggtgtttgatgcgcggagcagtgggagcgtg
ctctctgtggagcacgggcagcccgtggagagtgtgctgctgttcccttcgggcggtctc
ctcgtatctgcaggaggccggtacgttaaagtctgggacatactaaagggaggacagtta
ttggtgtccttgaaaaatcaccacaagacagtgacgtgtttgtgtctgagcagcaacggg
cagaggctgctctctggctcgctggatcggaaggtgaaagtgtacagcacaacctcctac
caggtcgtccacagcttcgactacgcagcttccattctgagtgttgcactgtcgcacgaa
gatgagacaatagttgtgggaatgaccaatgggattctgagtgtgaaacatcgaaaatct
gaggccaagaaggagtctcttcccaaaggaaggcggcctgcgtaccggacctttgttaaa
gggaaaagctacatgaagcagcgggatgacgttgccatcaacaggccagcaaagaagtac
ctggaattgtatgatagggatctgaagcatttccggatctctaaggccctcgatcgcgtc
cttgagccggagtgtaccctcaagacccccgaggtcacggtctccatcatcaaggagctc
agtcggagaggagtgctcgctaatgccctcgccggccgcgatgagaaggaaatcactcgt
gttcttaactttttgataaggaatctgcctcagccaagatttgctcctgttttgatcaat
gctgcggaaataattattgatatatatctgcctgtgattggtcaatcacctgtggttgat
aaaaaatttttggtactgcaaggacttgtagaaaaagagattgattaccaaagagaactg
ctcgaaaccttgggaatgatggacatgctttttgctaccatgacaaggaaagaaagcact
tctgtgttggaccattcatcagatggatttttagataacaagaagacagaatcatag
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