Ochotona princeps (American pika): 101522872
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Entry
101522872 CDS
T07609
Symbol
SNX5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101522872 (SNX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101522872 (SNX5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101522872 (SNX5)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101522872 (SNX5)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101522872 (SNX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
101522872
NCBI-ProteinID:
XP_004585690
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Position
4A:complement(13264377..13282829)
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AA seq
452 aa
AA seq
DB search
MVAESAGPPSAAVGPGRPAEAGSRRWRRQPSLFFPRTAWRPLLETRVVMAAVPELLQQQD
EDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDF
VWLHDTLSETAEYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEY
LAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVK
SADEVLFSGVKEVDDFFEQEKTFLINYYNRIKDSCGKADRMTRSHKNVADDYIHTAACLH
SLALEEPTVIKKYLLKVAELFEKLRKVEGRVSSDEDLKLTELLRYYMLNIEAAKDLLYRR
TKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKEELVNFKRKRVAAF
RKNLIEMSELEIKHARNNVSLLQSCIDLFKNN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggagtccgcagggcctccctccgctgccgtcgggcccgggaggccggcggag
gcggggtcgcggcggtggcggcggcagcccagcctcttctttcctcgcacagcctggcgg
cccctgctcgagacccgcgtcgtcatggccgcggttcccgagttgctgcagcagcaggac
gaggaccgcagcaagctgcgatcagtgtctgtggacctgaatgtggacccctcccttcag
attgacatacctgatgcgctcagcgagagagataaggtcaaattcacagtgcacaccaag
accacactgccaacgtttcagagcccggagttttctgttacaagacagcacgaagatttt
gtgtggcttcatgacacacttagtgagacagcagagtacgcggggcttattatcccacct
gcacccaccaaaccagactttgatggaccgcgagagaagatgcagaagctaggagagggt
gaagggtctatgaccaaagaagaatttgctaaaatgaagcaagaactagaggctgagtat
ctcgctgtctttaagaagactgtgtcctctcacgaagtctttctccaacggctttcttct
catcctgtgctcagtaaagatcgcaactttcatgttttcctggaatatgatcaggatcta
agtgtcaggcggaaaaataccaaagagatgtttggtggctttttcaaaagtgtggtgaaa
agtgctgatgaagtcctgttttctggagttaaggaggtagatgacttctttgagcaagag
aagaccttcctcattaactattacaatagaatcaaggattcctgtgggaaagctgacaga
atgaccagatctcataaaaatgtggcagatgactatatccacactgcagcctgcttgcac
agcctggctttggaagagcccacggtcattaaaaagtacctgttgaaggttgctgaactc
tttgaaaaacttaggaaagtagagggtcgagtgtcatctgatgaagacttgaagctgaca
gagctcctccggtactacatgctcaacatagaggccgcaaaggacctcttgtacaggcga
accaaagccctcattgactatgagaactccaacaaggccctggacaaagcccgcttgaaa
agcaaggacgttaagttggctgaggcacatcagcaggaatgctgccagaagtttgaacag
ctgtctgagtctgcgaaagaagaactggtaaatttcaagcggaagagagtggccgcattt
agaaagaatctaattgaaatgtctgaactggaaataaagcatgccaggaacaacgtctcc
ctcttgcagagctgcatagacttgttcaagaacaactga
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