Ochotona princeps (American pika): 101522916
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Entry
101522916 CDS
T07609
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101522916 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opi01007
]
101522916 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101522916 (VARS2)
Enzymes [BR:
opi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
101522916 (VARS2)
Amino acid related enzymes [BR:
opi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101522916 (VARS2)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101522916 (VARS2)
Prokaryotic type
101522916 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FmiP_Thoc5
DUF7801
Motif
Other DBs
NCBI-GeneID:
101522916
NCBI-ProteinID:
XP_004598845
LinkDB
All DBs
Position
12:29123619..29133960
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AA seq
1063 aa
AA seq
DB search
MPHLPLASLRPSLWGLRSSRGLCRLCPLSTQSQPHHGSPISRRNREAKQKRLREKQAALE
AGIAGESKTPAESSKAWSPKEVVLYEVPTEPGTKKDVSGPLPPAYSPQYVEAAWYSWWER
EGFFKPEYQALLPQSTGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLW
VPGCDHAGIATQTVVEKHLWREQGVRRHELSREDFLRAVWQWKEAKGGEICEQLRALGAS
LAWDRECFTMDMGFSLAVTEAFVRLHKAGLLYRSRQLVNWSCALRSAISDIEVESRALPG
RTELQLPGCPIPVSFGLLFSVAFRVDGEPDVEVVVGTTRPETLPGDVAVAVHPDDSRYTH
LHGRQLRHPLTGQLLPVITDLAVQPQMGTGAVKVTPAHSPADAEMGTRHGLCPQSAIAED
GTMTPLCGDWLQGLHRFVAREKIVSALRERGLFRGLQSHPMVLPVCSRSGDVVEYLLKSQ
WFVRCREMGDQAAKAVESGALEFNPAFHQKNWQHWFAHIGDWCVSRQLWWGHQIPAYQVV
EAKGDRQDCWVVGRTEAEARELAAALTGRPGAELTLERDPDVLDTWFSSALFPFAALGWP
QETPDLACFYPLSLMETGSDLLLFWVGRMVMLGTQLTGQLPFRKVLLHSMVRDGQGRKMS
KSLGNVLDPRDIIRGVELQVLQEKLRDGNLDPAELAIAAATQKKDFPHGIPECGTDALRF
TLCSHGALGGDLHLSVSEVLSCRHFCNKIWNALRFILNVLGEEFTPEPAEELCPASPMDA
WILSRLARTAQECERSFLTRELSLATHALHHFWLHNLCDVYLEAVKPQLLRSPRPQEPPQ
VLFSCADIGLRLLAPLMPFLAEELWQRLPPRPGGPLVPSICVAPYPSARSLEHWHQPELE
QRFSRIQEAVQALRALRATYQLTKARPRVLLQSSEPLEQDVFQAFLEPLGTLAHCGAVSL
LPRGTVTPSGWAQASLSDTAEVYMELQGLVEPKTHLPRLAARRQKLQKQLDSLKGRSPAD
GVAETQRQQRLSALQLELSKLDQAASHLQQLMAKSPSSGNSEP
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctctggcctcccttagaccatcactttggggtctcaggtcctcgcgg
ggcctctgcaggctctgtcccctttctacacagtctcagccccatcatggctctcccatc
tcccggaggaaccgagaggccaaacagaagcgcctgcgagagaagcaggcggcgctggag
gccgggatagctggggagagcaagacacctgctgaatccagtaaggcctggagccctaag
gaggtggtgctgtatgaagtccctacagaacctgggacaaagaaagatgtctcaggcccc
ctgccgccagcatacagccctcagtatgttgaggctgcctggtactcgtggtgggagcga
gagggctttttcaagccagaatatcaggccctgctgccccagtccacgggggagacgttt
tccatgtgtatcccacctcccaacgttacgggttccctgcacattggccatgcactcaca
gtggccatccaggatgccctcgtgcgctggcaccgcatgcgaggggatcgggtgctgtgg
gtccctggctgcgaccacgcaggaattgctacccagactgtagtggagaagcacctgtgg
agggagcagggtgtgaggaggcatgagctaagccgcgaggacttcctcagggccgtgtgg
cagtggaaggaggcgaaagggggtgagatctgtgagcagctgcgtgccctgggcgcctcc
ctggcctgggaccgagagtgtttcactatggacatgggcttctcactggccgtgactgag
gctttcgtgcggctccacaaggcaggcttgttgtaccgtagccgtcagcttgtcaactgg
tcatgcgccctaagatcagccatctctgacatagaggtggagagcagggctctgcctggc
cgcacggaactgcagctgcccggctgccccatcccggtgtccttcggccttctcttttct
gtcgccttccgtgtggacggagagcctgatgtggaggttgtggtgggcaccacgaggcct
gagacgctgcctggagatgtggctgtggccgttcatcctgacgactcccgatacacacat
ctgcatgggcgacagcttcgtcacccattgacagggcagcttctccctgtcatcaccgac
cttgcagtgcaaccgcaaatgggcactggggccgtgaaggtgacaccagctcacagtcct
gccgacgctgagatgggcacccggcatggcctgtgtccgcagagtgccattgcggaggat
ggcaccatgacgcccctctgtggggactggctacagggccttcaccggtttgtggcccgg
gagaagattgtgtctgcattacgggagcggggcctgttccggggtcttcagagccaccct
atggtgctacctgtctgcagccggtcgggggatgtggtggaatacctgctgaagagccag
tggttcgtccgctgccgggagatgggggaccaagctgccaaggctgtggagtctggggcc
ctggagttcaatcccgccttccaccagaagaactggcagcactggtttgcccacattggg
gactggtgcgtctcccggcagctgtggtggggccatcagattccagcttatcaggttgtg
gaggccaagggcgacagacaggactgctgggtggttgggcgaacggaggctgaggccaga
gagctagcagctgccctaacggggagacctggagcagagctgaccctggagagggaccct
gacgtcctggacacgtggttctcgtcggctctcttcccctttgctgctctgggctggccc
caggagaccccagacctggcttgtttctacccgctgtcgcttatggaaacaggcagtgac
cttctgctgttctgggtgggccgcatggtcatgctggggacccagctcacagggcagctc
ccctttcgcaaggtgcttctgcactccatggtccgagacgggcagggccggaagatgagc
aagtccttggggaatgtgctggacccacgggacatcatcagaggggtggagctgcaggtg
ctacaggagaagctgagagatgggaacctggatcctgctgagctggccattgcagccgcc
acgcagaaaaaggacttccctcacgggatccccgagtgtgggaccgatgccctgcgcttc
acactgtgctcccatggagccctggggggcgacttgcacctgtcggtctcagaggtcctg
agctgccgtcatttctgcaacaagatctggaatgccctgcgcttcatcctcaacgtcctg
ggggaggaattcacaccagaacctgcagaggagctgtgccctgcctccccaatggatgcc
tggatcctgagccgtctggcccgcaccgcccaggagtgtgagcgcagcttcctcacacgg
gagctctcgctcgccacccatgccctgcaccacttctggctgcataacctttgcgacgtc
tacctcgaggccgtgaagccccagctgttgcgctcaccccgcccgcaggaaccccctcag
gtcctgttctcctgcgcggacatcgggctccgcctccttgccccgctcatgcccttccta
gccgaagagctttggcagaggctgccccccaggcccggtggcccccttgtgcccagcatc
tgtgttgccccctaccccagtgcccgcagcctggagcactggcaccagcccgagctagag
caacgcttctcccgcatccaggaggctgtgcaggcgctgagggccctccgcgccacgtac
cagctcaccaaagcccggccccgtgtgctgttgcagagttctgagcccctagagcaagat
gtcttccaggctttcctggaacccctgggcaccctggctcactgtggggctgtaagcctc
ttaccccggggtacggtgactccctccggttgggcccaggcctcactcagtgacaccgct
gaggtctacatggagctgcagggcttagtggagcccaagacccacttgccccggctagct
gcccgaaggcaaaagctgcagaaacagctggacagcctcaagggtcggagtcctgctgat
ggggtggcagagacccagcggcagcaaaggctttctgccctccagctggagctgtcaaag
ctggaccaggcggcctctcacctccagcagctgatggccaagtcccccagctctgggaac
tcggagccctaa
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