Ochotona princeps (American pika): 101523048
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Entry
101523048 CDS
T07609
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101523048 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101523048 (PRPF3)
Spliceosome [BR:
opi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101523048 (PRPF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
101523048
NCBI-ProteinID:
XP_004588909
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All DBs
Position
13:110026421..110061296
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AA seq
683 aa
AA seq
DB search
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTTSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEQNPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLEGAD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtcgaagagggagctggatgaactgaaaccatggatagagaagacagtgaag
agggtactgggtttctcagagcccacagtggtcacagcagcattgaactgtgtggggaaa
ggcatggacaagaagaaggcagctgaccatctgaaaccctttctcgatgattctactcta
cgatttgtggacaaattgtttgaggctgtggaggaaggccggagctctaggcattctaag
tctagcagtgacaggagtagaaaacgagaactaaaggaggtgtttggtgatgactccgag
atctcgaaagaatcatcaggagtaaagaagcgtcgaataccccgttttgaagaagtggaa
gaggaaccagaggtgattcccgggcctccatccgagagccctggcatgctgactaagctc
cagatcaaacagatgatggaggcagcaacaagacaaatcgaagaaaggaaaaaacagctg
agctttattagcccccctacacctcagccaaagactacttcttcctcccaaccagagcga
cttccaattggcaacactattcagccctcgcaggccgctacgttcatgaatgacgccatt
gagaaggcaaggaaagcagctgagctccaagctcgtatccaagcccagctggccctgaag
ccgggtctcatcggcaatgctaacatggtgggcctggccaatctccacgccatgggcatt
gctcccccgaaagtagagttaaaagatcaaactaagcctacaccactgatcctagatgag
cagggtcgcactgtggacgccacgggcaaggagattgagctaacacaccgcatgcctact
ctgaaggccaatattcgtgctgtgaagagggagcagttcaagcaacagctgaaagaaaaa
ccatcagaagatatggagtccaataccttctttgaccctcgagtctccattgccccttcc
cagcgccagagacgtacttttaaattccatgacaagggcaaatttgagaagattgctcag
cgattacggacaaaggctcaactggagaagcttcaagcggagatttcacaggcagctcga
aaaacaggaatccatacttcgactaggcttgctctcattgctcctaagaaggagctaaag
gaaggagatatccctgaaattgagtggtgggattcttacatcatccccaatggctttgac
cttacagagcaaaatcccaagagggaagattattttggaatcacaaatcttgttgaacat
ccagcccagctcaatcctccagttgacaacgatacaccagttactctaggggtatatctt
acaaagaaggaacaaaagaaacttcggaggcaaacgaggagggaagcacagaaggaactg
caagagaaagtcaggctgggcctgatgcctcctccagaacccaaagtgagaatctctaat
ctgatgcgagtgttaggaacagaagctgttcaagatcccacgaaggtagaagcccatgtc
agagctcagatggcaaaaagacagaaagcgcatgaagaagccaacgctgcccgaaagctt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagatatttcacagggg
gtacacatatctgtatatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcagctgtacctgacgggggtggtggttctgcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggcccagaagaaatttaagcgtcttatgctgcat
cggataaaatgggatgagcagacatctaacacgaagggagatgatgatgaggagtctgat
gaagaagctgtgaagaaaaccaacaaatgtgtactagtctgggagggtactgccaaagac
cggagctttggagagatgaagttcaaacagtgccctacagaaaatatggcccgtgagcat
ttcaaaaagcatggggctgaacactactgggacctcgcactgagtgagtcggtgttggag
ggcgccgactga
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