Ochotona princeps (American pika): 101523059 Help Entry 101523059         CDS       T07609                                  Symbol HELQ Name (RefSeq) helicase POLQ-like   KO K19178   POLQ-like helicase [EC:5.6.2.4] Organism opi  Ochotona princeps (American pika) Brite KEGG Orthology (KO) [BR:opi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:opi03400]     101523059 (HELQ) Enzymes [BR:opi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      101523059 (HELQ) DNA repair and recombination proteins [BR:opi03400]  Eukaryotic type   Other factors with a suspected DNA repair function    Helicases     101523059 (HELQ) SSDB OrthologParalogGFIT Motif Pfam:  POLQ_helical HTH_61 Helicase_C DEAD HHH_5 ResIII DUF7898 DUF3135 DNA_pol_lambd_f DUF4332 RIMB1_N Motif Other DBs NCBI-GeneID:  101523059 NCBI-ProteinID:  XP_012783962 LinkDB All DBs Position 15:complement(58540096..58587496) Genome browser AA seq 1014 aa AA seqDB search MDEDDSRICRRVAVRKRVRPSIRVTLTDAELQRSNEEEEEEKEEEEVAECRRRKTVGVQP VEYDSEEDMFGDYDSFAENSLLAQVDDLEQKYMQLPEHTKQTTDFATEDLSSEINENELS IPTVGSFTELNTEEHTKEQSAPEEVRVEHGTDISYDVPSSQVLYFENLQNSSNGSGGQSN KERDLNSSSYGTRTEQLALDHIEHPQQNDAFSPKVRTSSDTNRRRSVRDHLKSAMTGNAK AQTPVFSRSKQLKETLLSEEMNVAKKAIEASSDDVGPFYSLPSKVRDLYAQFKGIEKLYG NAFCCNENITGLSSFGIELGFFVEEYAGSKGRFPPIKRREKKSLYVATIEKAHSLVNSLI ETGRISSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQEF LQAEYYTNQFRPVELKEYLKLNDSIFEVDSKAEKGMTFSRLLNYKYSDTLKKMDPDHLVA LVTEVIPKYSCLVFCPTKKNCENVAEMICKFLSKEYLKHKEKEKEDVIENLKNMSSGKLC PVLKRTVPFGVAYHHSGLTSEERRLLEEAYSSGVLCLFTCTSTLAAGVNLPARRVILRAP YVAKEFLKRNQYKQMIGRAGRAGIDTVGESILIFQEKDKQQVLELINRPLENCYSHLVQE FTKGIQTLFLSLIGLKIATNLGDIHDFMNGTFFGVQQNVLLKDKSLWEITVESLSYLTEK GLLQKEMVPGSEEEHQCNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESFLHL IYLTTPYDLVPQCDPDWMVYFRQFNQLSPAEQNVASRLGISESFIGKKASGQAIKKKVDK DIVNRLYLSFVLYALLKETNIWSVAEKFNMPRGYIQNLLTGAASFSSCVLHFCEELEEFW VYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYKAGYKSLTHLANADPEVLIRT VDHLSRRQAKQIISSAKMLLHEKAEALQQEVDELLRLPPDFPGPVDTPTEKAWS NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt atggatgaagatgattcccgcatctgccggagggtggctgttcgcaaaagggtccgtcca agcattcgtgtcacccttacggatgctgagctccagcggagcaatgaggaagaggaggaa gagaaggaggaggaggaggtggccgagtgccggaggcggaaaaccgtgggtgtgcaaccg gtcgagtatgacagcgaagaggacatgtttggtgactatgatagctttgctgaaaactcc cttttagctcaagttgatgacctggaacagaaatacatgcaacttcccgaacatacaaaa cagactactgactttgccactgaagatctttcttcagaaataaatgaaaatgaactcagc attcccactgtgggcagctttactgaattaaacacagaagagcacacgaaggaacagagt gcacctgaagaggtccgtgttgaacatgggactgatatttcatatgatgtgccttcctca caggttttgtactttgaaaatttacagaactcttcaaatgggtcagggggtcagtctaat aaagaaagggatctgaactcatcttcttacgggactaggaccgagcagttggcccttgat cacatagagcacccccagcaaaatgatgcgttctcgcctaaagtcagaacaagttcagat acgaacaggaggagaagtgttagagatcatctaaaaagtgccatgactggaaatgccaag gctcaaacgccggtgttttctaggagtaaacagctgaaagagactctcctatctgaagaa atgaacgttgctaagaaagccattgaggcctcatcggatgacgttggtcctttctattca ttgcccagcaaagtcagagacctctatgctcagttcaaaggaattgaaaaattatatggt aatgctttctgctgcaatgaaaacataacaggcctttcaagttttggtatagaacttggt ttctttgttgaagaatatgccggaagcaaaggaaggtttcctccaattaaaagaagggag aagaaatcgctctatgttgccactatcgaaaaggcacacagcctggtgaactccctgatt gaaaccgggagaattagcagtctggggctggtggttgttgatgagctgcacatgattggt gaaggaagccgtggggctacattggaaatgaccctagcaaaaatcctctacactagcaaa acaactcaaatcattggtatgagtgcaacactaaacaatgttgaagacctacaagagttt cttcaagcggaatattacaccaatcagtttagaccagttgaattaaaagaatatctgaaa ctgaatgacagcatatttgaggttgacagcaaggctgagaaaggcatgactttttcccgt ctccttaattacaagtactctgacaccctgaaaaagatggatcccgatcacttagtggca ttggtgacagaagtgattcctaaatattcctgcttagtcttctgccccacaaagaagaac tgtgaaaacgtggcagaaatgatatgcaaatttttaagcaaggaatatctgaagcacaag gagaaagaaaaagaagatgtgattgagaacttgaagaatatgagcagtggcaaactgtgt ccggttttgaagcgcacagtcccttttggcgtggcctaccaccacagtggcttgaccagc gaggagaggaggctgctggaggaggcctattcctcaggcgtcctctgtctgtttacctgc acgtccaccctggcggccggggtcaacctgccggcccgaagagttattttaagagctccc tatgttgctaaggaatttctaaagagaaatcaatataagcagatgattggaagagctggc cgtgctgggatagatactgttggagagagtatccttatctttcaagaaaaagataagcaa caggtgttggagttaataaacagacccctggaaaactgttacagtcatcttgttcaggaa ttcacaaaaggaatacaaactttgtttctgtctttgattggcttgaagattgcaacaaac cttggtgacatccatgactttatgaatggtacattttttggcgttcagcagaatgtttta ttgaaagacaagagtctctgggaaataactgtggagtccctgagctacctgacagaaaaa ggactcctgcagaaagaaatggtcccagggtcagaagaagagcaccagtgtaactttcat attacgaaacttggacgagcatcttttaagggaactatagatttagcttactgtgacatt ctctaccgagacttgaagaaaggtcttgaaggtcttgtgctggaaagctttcttcatctc atctacctaacaactccctacgatctggttccccagtgtgacccagactggatggtgtac ttcaggcagtttaaccaactcagtccagcagagcaaaatgtagcttctcgtcttggaatc tctgagagctttattgggaagaaagcatcaggtcaagccatcaaaaagaaagtggacaag gacattgtcaaccgactctacttgtcttttgttctttatgccctgctcaaagagacaaac atttggagtgtggctgaaaaatttaacatgcctcgaggatacatacagaatcttcttact ggagctgcgtcattctcatcttgtgtgttgcatttctgtgaggaactggaagagttttgg gtgtatagagcactgctggtggagctcaccaagaagctgacatactgtgtgaaggcagag ctgatccctctcatggaagtgacaggcgtgctggagggccgagcaaaacaattgtacaaa gcgggctacaaaagcctgacacacttagccaatgcagatccagaagtgctaatcagaaca gttgaccacttatcaagacgccaggccaagcaaatcatttcctctgcaaagatgctgctg catgagaaggcagaggctttgcagcaagaagtggacgagttgctgcgactgcctcccgac ttccctggccccgtggacacccccacggagaaggcgtggagctag

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