Ochotona princeps (American pika): 101523062
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Entry
101523062 CDS
T07609
Name
(RefSeq) toll-like receptor 12
KO
K18807
toll-like receptor 12
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
opi04054
]
101523062
Pattern recognition receptors [BR:
opi04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
101523062
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_9
LRR_LRWD1
DHU1_N
Motif
Other DBs
NCBI-GeneID:
101523062
NCBI-ProteinID:
XP_004591778
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Position
13:23875489..23878215
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AA seq
908 aa
AA seq
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MGRHLLLPGLLLFLPLIGGWMISNCLLIEDWLPRVSRFPTCPVDSRWHFLISCFQVKNVT
QTLEVVPRNVQGLCLSGSVSLVLSQDAFANFPGLKALGLSFGLPQLLPGALRGLAQLQQL
SFMAAKSDELFFLPSDAFSDLRTLQKLSFSGLCLAKNMSVQLPPKLRQLSVTLSCLQDVG
ELAYIFPDLIRGASSGNAWTLDLLDLSRNRKLKNISSGSLQGLSLGTLCLEHTQVEAAAV
MGLGLQRLDKLVMTHTRTLALPADVVAHLELQHLHLGINQIKSIAPKALPSCHSLKSLHL
QSTGLTELPPGFLAAMPRLQRLNLAYNQLQSVLLCADGTGAMSELWALDMSSNGLHTLPP
ATFSCLPQLRELILQGNQLTCLDGQEFQGLPRLTTLDLEKNPLVSLGEGWLAPLPALTTL
NLLDTHVVLSSARDLQGPENLHDLRLQLPSGPSGVALSLPTSLTSLELHVVWSRKPWVLA
SPVFPVLQTLTLEGGGLQLGSQNISELFPALRQLSLKGHALEALCSQGLSHVFLWQLHRL
QYLKVQGPMHNFRPCRITGLPGLQELQLKLLQSNLWPHPLQLEELVGDLPRLQVLMLANT
GLKSLSAAAFQGLSSLKALVLDGETHLVLDDSLQEHSLQMPPYLYITVSTLACSCANAWV
EPWLKQSPKTYVYFYYYYNHVCPLETGGQSKSPLFPFLQGHCPQTLGLELFVGCSLLLLL
LIALPLLQEARNSWVLYLQAWLRAWLQGLCGQKGEGRRFLYDVFVSYCEEDQGWVVQELL
PALEGCPPTGRGLRLCLPERDFEPGKDVADNIADSMAGSRVTLCVMSHQALHTPRCRLEL
RLATSLVLAAPQPPVLLLVFLERISRHQLPPYHRLAWLLRRGDYCLWLQEEEKKHFWDWL
GSRLSSLG
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcacctgctgctgcctggtctgctcctgttccttcctttaatcggaggctgg
atgatttctaactgcctgttgattgaagactggctgcctcgggtttctcgcttcccaacc
tgcccagttgactccagatggcattttcttatcagctgctttcaggtgaaaaatgttacc
cagaccttggaggttgtgccgcgcaatgtccaggggctctgtctctctggttctgtctca
ctggttctatcccaggatgcttttgccaactttccagggctcaaggccctggggctgagt
ttcggtctcccacagctcctgccaggagctctccggggtcttgcacagctgcagcaactc
tctttcatggctgccaagagcgatgagctgttcttcctaccctctgatgccttcagtgac
ctcagaaccctccaaaagctttccttctcaggactctgcctggccaagaatatgagtgta
cagttgcctccgaagctacggcagctgtctgtcaccctgagctgccttcaggatgtcggg
gagctggcttatatcttcccagatctgatacgtggtgcttcctctggcaatgcctggacc
ctggacctgttggatctatcacgcaataggaagctgaagaatatcagttctgggtctctc
cagggcctgagcctggggaccctgtgtctggaacatacccaggtcgaagcagctgcagta
atgggactggggctgcagaggctggacaagctggttatgacacacacacgcacgctggca
ctgccagctgatgtagttgcccacttggagctacagcacctgcatttggggatcaatcag
ataaagtccatcgcacccaaggccctaccttcctgccacagcctcaagagcttgcatctt
cagagcactggactgactgagctgccaccagggttcctggctgccatgcccaggctgcag
agacttaacctggcctataatcagctgcagagtgtcctgctgtgtgcagatgggacaggg
gctatgtcagagctatgggccctggacatgtccagtaatgggctgcataccctgcctcca
gccactttctcctgcctgccacagctacgagaactgatacttcagggaaaccagttgact
tgcctagatggacaggaattccagggcctcccgaggctaacgaccttggacttggaaaag
aatcctttggtatctctaggggagggctggctggcccctctgcctgcactgaccacccta
aacctgctagacacccatgtggtgctgagctcagccagggacttacagggtccagagaat
ctgcatgacttgagactgcagctcccctctggcccttctggggtagcactgtccctgccc
acgagcctgaccagcttggagctccatgtggtctggagcaggaagccctgggtgctggct
tctcctgtctttccggtcttgcagaccctgactttagaaggcgggggcttgcagttgggg
tcccagaacatctctgagctgttccctgctcttcgccagctctctctgaagggccatgcc
ttggaggccctttgctcccagggtctttctcatgtcttcctctggcagctccacaggctg
cagtacctgaaggtccagggaccaatgcacaacttcagaccctgccgtatcacggggctg
cccggtctccaggagctccagctgaagttgctgcagtccaacctctggcctcaccccctg
cagctggaggagctggtcggggacctgccccggttgcaggtattgatgctggccaacaca
gggctgaagtctctgtcggctgctgcattccagggcctcagcagtctcaaggccttagtg
ttggatggggagacacacttggtgctggacgacagcctacaggaacacagtcttcagatg
cccccgtacttgtacatcacagtttcgaccttggcctgcagttgtgccaatgcctgggtg
gaaccctggcttaagcagtcccctaaaacctatgtttatttctactactactacaaccat
gtgtgcccattggaaactggtggccagtccaagagccctctcttcccctttcttcagggc
cactgcccccagaccttggggctggagctctttgtgggctgctccttgctgctgctcctg
ttgatagccttgcccctcctccaggaagccaggaactcctgggtgctttatctccaggcc
tggctcagggcttggctccagggactgtgcggtcagaagggtgaaggcaggagattcctc
tacgacgtgtttgtgtcctactgtgaggaagatcagggatgggtggtgcaggagctacta
ccagctctggagggctgtcctcccactggccggggactgcgcctctgcctccctgagcgg
gactttgagccaggcaaggatgtggctgacaacattgctgacagcatggcggggagccgg
gttactctctgtgtaatgagtcaccaggccctgcacacaccccgctgccgcctggaactc
cgcctggccacctcccttgtgttggcagccccccaacccccagtgctgctgctggtcttc
ctggaacgcatttcccgccaccagctgccgccgtaccacagactggcttggctgctccgc
cggggagactactgcttgtggctccaggaagaggaaaaaaagcatttttgggactggttg
gggagcaggctcagcagtctgggttag
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