Ochotona princeps (American pika): 101523082
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Entry
101523082 CDS
T07609
Symbol
NPAS4
Name
(RefSeq) neuronal PAS domain-containing protein 4 isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101523082 (NPAS4)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101523082 (NPAS4)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
101523082
NCBI-ProteinID:
XP_004596699
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Position
1:113947904..113952962
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AA seq
802 aa
AA seq
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MYRSTKGASKARRDQINAEIRSLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGT
ALEGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIY
DIIDPADHLTVRQQLAMPSALNTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGA
YWAGNPVFTAFCAPLEPRPRPGPGPGPGPASLFLAMFQSRHAKDLAILDISESVLIYLGF
EHTELLCKSWYGLLHPEDLTHASAQHYRLLTESRDIQAEMVVRLQAKSGGWAWIYCLLYS
EGPEGPITANNYPISDPEAWSLRQQLSSEDTLASYVLSAPAMPTSFPENILSHEQCSNPN
PLFATALGAPRSTSFPSAAELGVVSGSEELPQPPKEVDFRYLTFPSGPAPSLQADLSKDL
VCTPPYTPHQPGGCTFLFSLHEPFQTHLPTPSSSLQEQLTPSTVTFSEQLTPSSATFPDP
LTSPLQGQLTEAPGRSYEEQLTPCTSTFPDPLLPSTATFPEPLGSPGHEQLTPPSTAFQA
QLSSPSQTFPEQLSPSATKTYFTQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSV
DVPLVPEGLLTPEASPVKQSFFHYSEKQQNGIDRLIQQISQLAQGMDRPFSAEAGTGGLE
PLGGLEPLDSNLSLPGAGPPVLSLDLKPWKCQELDFLVDPENIFLDEMPVEDIFMDLSTP
DPNGEWSSGDPEAEGPGGAPSPHNNLSPEDHSFLEDLATYETAFETGVSAFPYDGFTDEL
HQLQSQVQDSFHEDGSGGEPTF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctccaccaagggcgcctccaaggcgcgccgcgaccagatcaacgcggagatc
cgaagcctcaaggagctgctgccgctggccgaagcggacaaggtgcggctgtcctacctg
cacatcatgagcctcgcctgcatctacacccgcaagggcgtcttcttcgctggaggcaca
gctctggagggccccacagggctcctctcagcccaagagcttgaagacatcgtggcagcg
ctacctgggtttctgcttgtgttcacagcagaggggaagttgctgtacctgtctgagagt
gtgagcgagcaccttggccattccatggtggatttggttgcccaaggagatagtatctac
gacatcattgatccagctgatcacctcaccgtgcgccagcagcttgccatgccctctgcc
ctcaacactgatcgcctctttcgctgccgcttcaacacctcgaagtcccttaggcgccag
agtgcaggcaacaagctggtgcttattcgaggccgattccatgctcacccacctggagcc
tactgggcaggaaaccctgtgttcacagctttctgtgccccattggaaccaagacctcgt
cctggccctggccctggacctggccctgcctctctcttcctggccatgttccagagccgt
catgccaaggatctcgccatactggacatttctgagagcgtcctcatctacctgggcttt
gaacacacagaactgctgtgtaaatcgtggtatggactgctgcaccctgaagacctgacc
catgcttctgctcaacactaccgcctgttgactgagagtagagatatccaggcggagatg
gtggtgaggctgcaggctaaatccggaggctgggcgtggatttactgcctgttgtactcc
gaaggtcctgagggccccattactgccaataactacccgatcagtgacccagaagcctgg
agcctccgccagcagctgagctccgaagacaccctggcatcctacgtcctgagtgccccg
gccatgccaacctcgttccctgagaacatcctctctcacgagcaatgctccaacccaaac
ccactctttgctacagccttgggggctcccagaagcaccagcttccccagtgctgctgaa
ctgggcgtcgtctctggctcagaagagcttcctcagccccccaaagaggtggacttccga
tacctgaccttcccatctgggcctgcaccttctctccaggcagacctgagcaaggatctt
gtgtgcacgccaccgtataccccccaccagccaggaggctgcaccttcctgttcagcctt
cacgagcctttccagactcacctgcccaccccatccagctctctccaagagcagctgact
ccgagcaccgtgaccttctccgaacagttgacacccagcagcgccaccttcccggatcca
ctcaccagcccactgcaaggccagttgaccgaagcgccaggcagaagctatgaagagcag
ctgactccttgcacctccaccttccccgacccgctgctgcccagcactgccactttccca
gagcccctgggcagccctggccatgaacagctgactccccccagcacagcatttcaagca
cagctgagcagccccagtcaaacattcccagaacagctgagccccagtgctaccaagacc
tactttacccaggagggatgcagttttctctatgagaagttgccaccaagtcctagcagc
cctggtaatggggactgcacacttctggccctcgcccagctccgggggcccctctccgtg
gatgtgcccctggtgcccgaaggcctgctcacccctgaggcctccccggtcaagcagagt
ttcttccactattctgagaagcagcagaatgggattgaccgtctcatccagcagattagc
cagttggctcagggcatggacaggcccttctcagctgaggctggcaccggtgggctggag
cccctgggaggcctggagcccctggactccaatctgtccctgccgggggctggtccccca
gtgctcagcctggacctgaaaccctggaagtgccaggagctggactttctggttgaccct
gagaacatattcctggatgagatgcccgtggaagacatcttcatggatctctccacccca
gaccccaatggggaatggagctcgggggatcctgaggcagagggcccaggaggggcccca
tcgcctcacaacaacctgtccccagaagaccacagcttcctggaggacctggccacatac
gaaaccgcctttgagacaggtgtctcagcattcccctacgatgggtttactgatgagttg
catcaactccagagccaagttcaagacagcttccatgaagatggaagtggaggggaacca
acgttttga
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