Ochotona princeps (American pika): 101523170
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Entry
101523170 CDS
T07609
Symbol
LAMC2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04151
PI3K-Akt signaling pathway
opi04382
Cornified envelope formation
opi04510
Focal adhesion
opi04512
ECM-receptor interaction
opi05145
Toxoplasmosis
opi05146
Amoebiasis
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101523170 (LAMC2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101523170 (LAMC2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101523170 (LAMC2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101523170 (LAMC2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101523170 (LAMC2)
09162 Cancer: specific types
05222 Small cell lung cancer
101523170 (LAMC2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101523170 (LAMC2)
09174 Infectious disease: parasitic
05146 Amoebiasis
101523170 (LAMC2)
05145 Toxoplasmosis
101523170 (LAMC2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
EGF_Teneurin
EzrA
Motif
Other DBs
NCBI-GeneID:
101523170
NCBI-ProteinID:
XP_004579036
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All DBs
Position
16:790164..819085
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AA seq
1223 aa
AA seq
DB search
MGTLRRVWGAKGTAQALEGAVGGSQRPQAQVSRKLEAGPRRTADHPGGGGAPGEQGPPPP
DCAARARPAQVSESLWKRGVFLPGLSQGEARLKPAEGARRERRRGSAEPTAMPALWLRCC
LCLALLPAARAASGSADTTATGTVMSQLLVALVARVQVGNITAAPRCSDHGLRCSGEKRT
IQFQFTVFERARSSQGGVCDCNGKSQQCTFDQELFRQTGSGFRCLRCEDNTDGAHCEKCK
EGFHRPRGGDRCLPCDCSPTGSLSTQCDTSGHCSCKPGVTGDKCDRCQPGFHSLTSSGCS
QDRGTRSPQCDCDPAGVVKPCEAGRCACKTAVTGERCDRCRPGHYYLEQDNPEGCTPCFC
YGHSDNCRSATQYSVHRVASTFPRDADGWRAVQRNGAPARLQWSPHHHDVFSSARRAEPV
YFVAPAKFLGNQQLSYGQRLSFDYRVDRGGRQPSAHDVVLEGAGLRVSAPLAPRGKMLPC
GVSKTYTFRLSEHPSSHWSPQLSFLEYRRLLRNLTALRIRATYGEYSTGYLDNVTMISAR
PVPGAPAPWVEECACPAGYRGQFCQDCASGYKRDAAGLGPFGACVPCNCQGGACDPDTGD
CYAGDENPGIQCADCPAGFYNDPQDPRGCKPCPCGEGLGCSVVPETEEVVCSSCPLGAMG
ARCESCADGYFGDPLGEHGPVRPCQPCQCNNNVDPRASGNCDHVTGRCLKCIHNTAGAHC
DQCPAGYFGDPLAPHVEDKCRACNCNPAGSENGQCRRDGSCVCKPGFSGPSCEREVQATV
PTSCPACYQQVHSQLDLLTEQLRNLEALVSKAQGSAVPDSELEGRLQQAERALQDILQEA
QVSQDAGRALGFQLAKARSQENNFRARLAELRRTAESLLALGGPHLRQAQDTRRLLTQTR
LHLEESDASLQNIQVPLSSEHGVGPGSFRSLAQEAMRLADSPRGPLLSMSEQLLSRASLA
RSRAQDAFSMGNATFYEVDSILQSLQEFDLQVGDRRAEAEEAMRRLSSISQKVAASSART
RQAEAAMGSAAADAQRARSAAAEVQQIARGIEQDIGSLNLEANGTADGALALEKGLATLK
SDLRELEGELASKGLELDSDMDTVQAVAVEAQRVGAGAESAGAAVQGTLSMLDSVLQLLD
QPGSVDEARLTSLEQELSRARTQIRSQLRPLMAELEDRVRRQRGHLGLLESDIASVLADV
RNLESVRDTLPPGCYNTQALEQQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggggaccctgcgtcgcgtgtggggggcaaagggcacagcccaggctctggagggggca
gtgggcggctcccagcggccgcaagcccaggtgagccggaagttagaggccgggcctagg
cgcacggcggaccacccgggaggaggaggagcgccaggcgagcaggggccgcccccgccc
gactgcgcggcccgggcgcgcccagctcaggtgagtgagtcactctggaaacgcggtgtc
ttcctgccaggcctgagtcagggggaggcgcgcttaaaaccagctgagggcgcgcggagg
gagcgccgccgagggagcgccgagcccacggccatgcccgcgctctggctgcgctgctgc
ctgtgcctcgcgctgctgcccgctgcccgcgccgcgtccgggagcgcagacaccactgcc
acgggaaccgtgatgtctcagctgctggtcgctttggtggccagagttcaggtgggcaac
atcaccgctgctcctcgctgctctgaccacggcctgcgctgctctggggagaaaaggaca
atccagttccagttcaccgtctttgagcgggcacggtcctcgcagggaggcgtgtgtgac
tgcaatggcaaatcccagcagtgcaccttcgaccaggagcttttccggcagacgggcagt
ggcttccgctgtctccgttgcgaggacaacacggatggcgcccactgtgagaagtgcaag
gagggcttccaccggccccgaggtggggatcgctgcctgccctgcgactgcagccccaca
ggttctctcagcacacagtgcgacacctctggccactgcagctgcaagccaggggtgacg
ggcgacaagtgtgaccgctgccagcctggcttccactcgctcaccagttccggctgcagc
caggaccggggaacacggagcccacagtgtgactgtgaccctgctggcgtggtgaagccc
tgtgaggcgggccgctgtgcctgcaagacagccgtcactggagaacgctgtgacaggtgt
cggcccggtcactactacctggagcaggacaaccccgagggctgcaccccatgcttctgc
tatgggcactcagacaactgtcgcagcgccacccagtacagcgtgcaccgggtcgcctcc
accttcccccgagatgcggacggctggagggccgtgcagcggaacggggccccagcgagg
ctccagtggtcgccacaccaccacgacgtgttcagttccgcccggcgggctgagcctgtg
tactttgtggcccctgccaagttccttgggaaccagcagctgagctacggtcagaggctg
tccttcgactaccgtgtggaccggggaggccggcagccatctgctcacgacgtggtcctg
gaaggcgccggcctgcgggtctcggcccccctggcaccgcgcggcaagatgctgccttgt
ggggtctccaagacttacacattccggttgagcgagcacccaagcagccactggagcccc
cagctgagcttcttggagtataggcggctgctgcggaacctcacagcgctccggatccga
gccacatacggagaatacagcactgggtacctggacaacgtgaccatgatctcagcccgc
cccgtgcccggggcccctgcaccctgggtggaagagtgtgcgtgcccagctgggtaccgt
ggccagttctgtcaggactgtgcctctggctacaagagagacgctgcagggctggggccc
ttcggcgcctgtgtgccttgcaactgccaaggcggggcctgcgatcctgacacaggagac
tgctacgcaggggacgagaaccctggcatccagtgtgccgactgccctgcaggcttctac
aatgacccccaggaccctcggggctgcaagccatgcccgtgcggcgaggggcttggctgc
tcggtggtgcccgagaccgaggaggtggtgtgcagcagctgccctctgggggccatggga
gcccgctgtgagtcctgtgctgatggctattttggggaccccttgggggaacacggcccc
gtgaggccttgccagccatgccagtgcaacaacaacgtagaccccagggcctctgggaac
tgtgatcacgtgacgggcaggtgtctgaagtgcatccacaacacggctggtgcccactgc
gaccagtgcccagcgggttacttcggggacccactggctccacacgtagaggacaagtgt
cgagcttgtaactgcaaccctgcgggctcagagaacgggcagtgtcgccgggacggcagc
tgtgtctgcaagccagggttcagcggccccagctgtgagcgggaagtccaggccacagtg
cccaccagctgcccagcctgctaccagcaggtgcactctcagctggacctgctcacagag
cagctccggaacctggaggccctggtttccaaggcccagggcagcgcggtgcctgactcg
gagctggagggccgcctgcagcaggccgagcgggccctgcaggacatcctacaagaggcc
caggtctcccaagacgctggcagagcccttgggttccagttggccaaggcaaggagccaa
gagaataacttccgggcgcggctggctgagctcaggcgcacggccgagagcctgctggcc
ctgggtgggccacacctgcgccaggcgcaggacacccgccgactgctcactcagacgcgc
ctgcacctggaggagagcgacgcgtcactgcagaacattcaagtgcccttgtcctcggag
cacggtgtgggccccggcagcttcagaagtctggcccaggaggccatgaggctggcagac
agccctcggggacccctgctgagtatgtcagagcagctgctttcccgtgccagcctggct
aggagccgcgcccaggacgcgttcagcatgggcaatgccaccttctatgaagtggacagc
atcctgcaaagcctccaagagtttgacctgcaggttggagacagaagagcagaggccgag
gaggctatgaggagactgtcctccatcagccagaaggtcgcggcaagcagcgccaggacc
aggcaggccgaggcagccatggggagtgctgctgctgacgcccagcgggccaggagcgca
gctgcagaggtgcagcagattgcgcgtgggattgagcaggacattgggagtctgaacttg
gaagccaacgggacagcagatggggccttggccctggaaaagggactggcaacactgaag
agtgacctgcgggagctggaaggagagctggccagcaaagggctggagctggactcggac
atggacactgtgcaggcggtggctgtagaggctcagcgagttggagctggagcagagagt
gcgggtgccgcagtgcagggcacgctgagcatgctggacagtgtcctgcagcttctagac
cagcccggcagcgtggacgaggcgcggctgacctcgctggagcaggagctgtcccgagcc
aggacacagattcgcagccagctgcggcccctgatggcagagctggaagaccgggtgcgg
aggcagcggggccacctgggtctgctggagagcgacatcgcatccgtgctggccgacgtg
aggaatctggagagcgtgcgggacaccctgccgcccggctgctacaacacccaggccctg
gagcagcagtga
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