Ochotona princeps (American pika): 101523194
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Entry
101523194 CDS
T07609
Symbol
TTC6
Name
(RefSeq) tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101523194 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
101523194 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_16
TPR_9
TPR_14
TPR_12
TPR_19
ARM_TT21_N
TPR_CcmH_CycH
COPI_C
TPR_Slam
ARM_TT21_5th
Methyltransf_3
ANAPC3
Motif
Other DBs
NCBI-GeneID:
101523194
NCBI-ProteinID:
XP_036351371
LinkDB
All DBs
Position
17:complement(31593509..31778260)
Genome browser
AA seq
1737 aa
AA seq
DB search
MSMIPKHFGLKPREESYIFKELEKLRQDTKKDFLRLGHKLASRPLLEEAPIRRLQGPDSV
HPAGQKSVSPARVGVLPAPPLARGPQAREQERLPSAARPLDLGEAAARPKTRTFRPQEFY
LRSSAFRRYPFQKKPPLIASGVGTSKPVVLLPPPAPLLRPRARPVPVTPRPAASKQATDS
ARALEVLQELAPSVDPRRANARKTSSLSSEDSDVAPSRWRHVRTTTHFLSQLSRGEAGEA
AGPGLRAQRASRQASDGLEASWLTLPPRRPTPTSFKEIFTSLYSETQLASDQTIKELIQS
ILGPSYDFRMEVGEALTSVLEELPEAASSVLQMEQDDGSEWGDSEIESMTFKSPEISEVQ
VVEKASKPLEDVQLTRESKAGKQLLLKEKPSKLLHITGKGVKRVRKSNLGIPPLRSGKSS
KFLRAQKLPKKIPPHYPTHHFHDLCSTIPAQELPVDLSLASRLYHTTNKKGHDVLREVFG
FPFLDDRFTEEEQRARILYGIPVVSENQEYVSVPPSSPGILFESPQADRQRAETPYMQVL
GEEMPAYPGLSKLLWSPAAPKFSVPESVMKKTLYPKYESVQTSLILSERFSWENEENIII
ERSKSICRRVKSAFELRKEETTVPLEVKDDMQSNMKEVMFQKAKEWEFLLAQQEKAKASQ
PEKENIDVILDSIQEKETLRDLSFSLIEASRKAGITYIVYPKKTKMKLKRRLRPEKLTHI
YEELSKPPKMIHRSTSHGILPGQKKYFIRLPFYERPIRSPSLPPYLNFDKFAESKGGIPE
NSNPRTWMLDTLIKYKLKKQSTEVAKVSVLEDLPKPVTELKILELSDYLKCDLPPEVIEH
YESEVKILTEEIDRKNTFPVFEYCRRGVIYRKLGKLKSAMNDLQKVINAEPLFLNAYWHR
HFIYLFQDKIIEALDDLNFISKHNKNNAEVYLSKAEIFRRQNDSIFAILNYSQAIKCRPT
DADLYFRRGEMHEKQNRALAIDDFSKCIFYDPKRADALFKRGMFYYENENWILAIQDFTA
LLNIDHQNSQVRTYRGRAYFKQRFYKQATQDLSAAVHLDPNNWLALYYRACLFRRTNPFR
ALQDYSVSALINDGYENLSCFLHRGIIYANLKLWMLAICDFETAISLERAIVLPYINIGL
IHLLHLDNYTEAIGQFSEAIRIDPLYIQSYICRAEAFHKVNKLKTAVNDLSRAIHLQPDG
IQLYIIRGQYLLMMKNYELAKFTIYQVAEMNRGLIDLTPIQQALIYSFCENHQKAIQVLE
GLTWSRPDIVLFAVIAKAHMKARRTKTYKLAIRDLTIVINMDKRNYISFYNRAICYTKIG
ELQMAFEYFTKAVKVNPDFAESFYQRGLCKAKLRKDNSILDFNRAITLNPKHYQALTDYG
VVLLLDPGETITLNTFINRGCIYVELGQHCFAVEDFKQAALMSQTDVSLHQATAVCHHRI
EEFEEAVNFFTEALKINPHSLDAYIGRGNSYMEYDEEERTKQAQKDFVTVLHFNPAYTKA
RISLAYNLQAQGKFQKAWNHFTIALEADPKSYLAYEGRAVVCLQMGNNFAAMQDINVAIK
INTTAEYLTNRGVIHESMGQQQNAMRDYQTAISLNPEYSLAYFNAGNIYFHHRQFSQARD
YFSKALKFDPENEYARMNRAVAHTLLKNYEGAKEDFARVIDSCPSWAAVYFNRAHLYCCL
KQYELAEVDLNKALSLKPRDALIYNLRAEVRGKIGLIEEAVADYNLALDLEEGASVK
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatcccgaagcactttggactgaaacccagagaagaatcgtacatatttaaa
gagcttgagaagcttcgccaggatactaagaaggattttctcagactcgggcacaaatta
gcctccaggccgctcttagaggaagcacccattcgccgccttcagggcccggactcagtc
caccctgcaggccagaagtctgtttcccctgctagagtcggggtgctaccagcgccccct
ttggccagaggaccccaagcccgtgagcaggagaggctgccaagtgccgcgcgccccctg
gacctgggcgaggcggccgcgcggccgaagacccggacattccgcccccaggagttctac
ttgcggagctccgcgttccgccgctacccctttcagaaaaagccgccgctcatcgcctcc
ggggtgggcacctcgaaacctgtggtcctgctgccgccgcccgcgccgctcctcaggccg
agggcgcgcccggtgcccgtgaccccgcggcccgcagcgtccaagcaggccacagactcg
gcccgggcgctcgaagtcctccaggagctggctccatccgttgacccgcgcagggccaac
gccaggaagaccagctccctttccagcgaggacagcgacgtggccccgagcaggtggagg
cacgtgaggaccaccacccacttcctgagccagctttcccgcggcgaggccggggaagcg
gccgggcccgggctcagggcccagcgcgccagccgccaggccagcgacgggttggaggcc
tcctggctgaccctgccgccccggcgaccgacccccacgtccttcaaggagatcttcacc
tcgctgtactcggagacccagctggcctctgaccagaccatcaaagagctcatccagagc
atcctgggcccgagctacgacttcagaatggaagtaggtgaagccctgactagtgtgctc
gaggagcttcctgaagcagcatccagtgttctccagatggagcaggacgatgggtcggaa
tggggagactcagagatagaaagcatgacatttaaatctccggaaatttcagaagttcag
gtagtggagaaggcaagtaaacccctggaagatgtacagctcaccagagagtcaaaagca
ggcaaacagctgctcttaaaggagaaaccatcaaaattactgcacatcacaggaaaaggt
gttaagcgagtacgaaaaagtaatttaggaattccaccactgagatcaggaaagtcttca
aaattccttcgggctcaaaaactacctaaaaaaatcccgccacattaccccacacaccac
ttccatgatctgtgcagcaccatcccagcccaggagctgcctgttgacctgagtctggct
tctcggctgtatcacaccaccaacaagaaaggccatgatgtgctacgcgaagtgtttgga
tttcccttcttagatgatcgctttacagaggaagaacaaagagccagaatactatatgga
attcctgtggtcagcgaaaaccaagaatatgtcagtgtccctccgtcatcaccagggata
ctgtttgaatcaccacaagcagatagacagcgtgctgaaacaccttacatgcaagtctta
ggagaagaaatgccggcttacccaggactttccaagttgttgtggagtccagctgcacct
aaattttctgttccagaatctgtcatgaagaaaaccctatatccaaaatatgagagtgtt
caaacaagtcttattttatctgagagattttcatgggaaaatgaagaaaatattattata
gagcgtagcaaaagcatttgtaggagagtaaaatctgcctttgaactgaggaaggaggag
acaacagttccattagaagtcaaagatgacatgcaaagcaatatgaaagaggtgatgttc
cagaaagccaaagaatgggagtttctgctcgctcagcaagagaaagccaaggcatcccag
ccagagaaagaaaacattgatgtcatcttggacagcattcaggagaaggagacgctgaga
gatctgtctttctcgctcattgaagcttccagaaaagctggcatcacttacattgtctat
cccaagaaaacgaagatgaagttgaagagaagactgagacctgagaaactcacacacata
tatgaggagctatccaagcctccgaaaatgatacacaggtcaacatcacatggaatactt
cctggacagaagaaatattttatcaggttgccgttctatgaacgtccaatacgtagtccc
agcttgcctccctatttaaattttgacaagtttgctgaaagtaaaggaggaattccagaa
aacagtaatcctcggacatggatgctggatacactgattaagtataaactgaagaaacaa
tccacagaagttgcgaaagtatctgtgcttgaagacctacccaaaccagtgacagagtta
aaaatcctggaattaagtgattatttgaagtgtgatcttccaccagaagttattgaacac
tacgaatctgaagtgaaaatcttgactgaagaaatagacagaaagaacacatttcctgta
tttgagtattgtaggcgtggagttatttacagaaaactgggaaagttaaagagtgctatg
aatgatctacagaaagttataaatgcagaaccattgtttctcaatgcctactggcaccgg
catttcatttatcttttccaagacaaaatcattgaagcattggatgatttgaattttata
tccaaacataataaaaataatgcagaggtgtatctgtcaaaggcagaaattttcagaaga
caaaatgattctattttcgcaattctaaactatagtcaggcgattaagtgcaggccgaca
gatgctgacttatatttcaggaggggtgagatgcatgaaaaacaaaacagagctctggcc
attgatgacttttctaaatgtattttttatgatcccaaaagagcagatgcattatttaag
cgtgggatgttttattatgaaaatgaaaactggattctagccatacaggattttacagcc
ttgttaaatatagatcaccaaaattcccaagtaaggacatatcgagggagagcatatttt
aaacaacgcttttacaagcaagcaacacaagacctttctgctgcggttcacttagatcct
aataactggttagcgttgtattaccgagcttgcttatttagaaggactaacccttttcga
gcgctgcaggattacagtgtttcagctcttataaatgatggctatgagaatcttagctgt
tttctacaccggggcataatctatgcaaatctaaaactttggatgctggccatttgtgac
tttgaaactgcgatttctctggagcgagctattgttttgccttacataaatattggcctc
atacatttgttacacctagataactataccgaagccattgggcagttttctgaggccatt
cgaattgatcctttgtatattcaaagctacatttgccgagcagaagcctttcataaggta
aataaattgaaaacggcagtaaatgacttatcccgtgctatacaccttcagccagatgga
atccaattatatataataagaggacaatatcttcttatgatgaaaaactatgaacttgca
aagttcactatttatcaagtagcagaaatgaacagaggtctcattgacttgactcctatt
caacaagcactcatctattcgttttgcgaaaaccatcagaaggccattcaggtcttagaa
ggactcacgtggagtagacctgacatagtgctgtttgctgtaatagcaaaagcgcatatg
aaggcaagaaggaccaagacttataagctagcaattagagatttaactatagttatcaac
atggacaaaagaaattatatatcattttacaacagagcgatatgttacaccaagatagga
gaacttcaaatggcatttgaatattttacaaaggctgtgaaagtaaatcctgattttgca
gaaagcttttaccaacgagggctttgtaaagcaaaactccgcaaggataactcaattctg
gattttaatcgtgcaattactctcaaccccaaacattaccaggcattgacagattatggt
gttgtcctgctcctcgatcctggagaaactataacattaaataccttcattaatcgtgga
tgtatttatgtggagctagggcagcactgctttgcagtagaggattttaaacaggctgca
ctgatgagccagactgatgtgagtcttcatcaagccactgctgtgtgccaccacagaatc
gaagagtttgaagaagctgtcaatttctttactgaggctctcaaaattaacccacattcc
ctcgatgcttacattggacggggcaattcttacatggaatatgatgaggaagaacgcacc
aagcaagctcagaaggactttgtgacagtgttacatttcaacccagcatacacaaaagcc
agaattagcttagcctataatttgcaggcccaaggaaaattccagaaagcttggaaccac
tttaccattgctctagaagccgatccaaagagctacctagcgtatgaaggaagagctgtg
gtctgtcttcaaatgggtaataatttcgctgcaatgcaggatatcaatgtagctatcaag
atcaataccacagcagaatacttaacaaaccgtggtgtgattcacgagtcgatgggtcaa
caacagaatgcaatgagggactatcaaacagcaatttctctgaaccccgagtactcgctg
gcttattttaatgcaggaaatatctacttccaccacaggcagttttcccaggccagagac
tacttctcaaaggctttaaaatttgatccggaaaacgaatatgcccgcatgaatcgagct
gttgctcatacattattgaagaactatgaaggagcaaaagaagattttgcacgtgtaatt
gacagctgtccttcatgggctgcagtatatttcaatagagcgcatttatactgctgttta
aagcaatatgaacttgcagaggtggatcttaataaagccctgtctttgaagcctagggat
gctctcatatataatcttagagcagaagttcgtggtaaaattggtctgattgaggaagcc
gtggctgactataaccttgcacttgatctggaagaaggtgcctcagtcaaatga
DBGET
integrated database retrieval system
