Ochotona princeps (American pika): 101523198
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Entry
101523198 CDS
T07609
Symbol
SLC22A4
Name
(RefSeq) solute carrier family 22 member 4 isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
101523198 (SLC22A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101523198 (SLC22A4)
Transporters [BR:
opi02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
101523198 (SLC22A4)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
101523198 (SLC22A4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
101523198
NCBI-ProteinID:
XP_004586447
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Position
3A:complement(38299647..38336225)
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AA seq
553 aa
AA seq
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MRDYEDVTAFLGEWGPFQRLIFFLLSASIIPNGFNGMSAVFLTATPEHHCRVPDSVNLSS
AWRNNSVPLLLQNGREVPHSCRRYRLATIANFSALGLEPGRDVDLEQLEQEGCLDGWEYS
QDVYLSTIVTEWNLVCENDWKTPLTTSLFFVGVLFGSFVSGQLSDRFGRKSILFSTMAVQ
TGFSFLQIFSVSWEMFTVLFIIVGMGQISNYVVAFILGTEILGKSVRILFSTLGVCTFFA
VGYMLLPLFAYFIRDWRMLLLALTVPGVLCVPLWWFIPESPRWLLSQKRFREAEVIIQKA
AKMNNKVAPAVIFDPVELQDPHPLKEQKVFILDLFRTRNIATLTIMSVLLWMLTSVGYFA
LSLDSPNLHGDVYLNCFLSALIEVPAYVTAWLLLRTLPRRYIISGVLFLGGGVLLLIQLV
PADYSFVSIGLAMLGKFGITSAFSMLYVFTAELYPTLVRNMAVGVTSMASRVGSIIAPYF
VYLGAYNRLLPYIIMGSLTIFIGIVTLFFPESFGVTLPETLDQIQKVKGFRSGKKSRDLL
EREENPKVLVTAF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcgggactacgaggacgtgaccgccttcctgggcgagtgggggcccttccaacgcctc
atctttttcctgctcagcgccagcatcatccccaacggcttcaacggcatgtcagccgtg
ttcttgacggcgaccccggagcaccactgccgggtgcccgactcggtgaacctgagcagc
gcgtggcgcaacaacagcgtcccgctgctgctgcagaatggccgcgaggtgccccacagc
tgtcgccgctaccggctcgccaccatcgccaacttctcggcgctgggactggagcctggg
cgcgatgtggacctggagcagctggagcaggagggctgcctggatggctgggagtacagc
caggacgtgtacctgtccaccatcgtgaccgagtggaacctggtgtgtgagaatgactgg
aagacgccgcttaccacctcgctgttcttcgtgggcgttctgttcggctccttcgtgtcc
ggtcagctgtccgacaggtttggcaggaagagcattctcttctccactatggctgtgcag
accggcttcagcttcctgcagatcttctctgtcagctgggagatgttcaccgtgctgttt
atcatcgtgggcatgggccagatctccaactatgtggtggccttcatactaggaacagaa
attcttggcaagtcagttcgtattctattctctacgttaggagtgtgcacattttttgca
gtaggctacatgctgctgccgctgtttgcttacttcatcagagactggcggatgttgctg
ctggcgctgacggtgccgggggtgctgtgtgtcccgctgtggtggtttattcctgaatct
ccacggtggctgctatcccagaaaagatttagagaggctgaagttatcatccaaaaggca
gcaaaaatgaacaacaaggtggcaccagcagtgatatttgatcctgtggagctgcaagat
ccacaccccctgaaggagcagaaagttttcattctggacctgttcaggactcggaatatt
gccacactaaccattatgtctgtgctgctgtggatgctaacctcagtgggttactttgct
ctttctctcgactcccccaatttacacggtgacgtctacctgaactgtttcctctcagcc
ttgattgaggtccctgcctatgtcacagcctggctgctgctgcgaaccctgcccaggcgc
tatatcatctccggggtgctgttcttgggaggaggggtgctcctgttaattcagctagtg
cctgcagattacagtttcgtgtccattggtctggcgatgctagggaagtttggaatcacc
tctgccttctccatgttgtacgtcttcaccgccgagctgtacccaaccctggtcaggaac
atggctgtgggggtcacatccatggcctccagggtgggcagcatcattgctccctacttc
gtttacctgggtgcttacaacagactcctgccctacatcatcatgggcagtctgacaatc
ttcatcggaatcgtcaccctttttttccctgaaagttttggagtgactctgccggaaacc
ctagaccagatacagaaagtgaaagggttcagatctgggaaaaaatcaagagacttattg
gagagagaagaaaatcccaaagttctagtgactgcgttctga
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