Ochotona princeps (American pika): 101523232
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Entry
101523232 CDS
T07609
Symbol
TNFRSF1B
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 1B
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04060
Cytokine-cytokine receptor interaction
opi04061
Viral protein interaction with cytokine and cytokine receptor
opi04668
TNF signaling pathway
opi04920
Adipocytokine signaling pathway
opi05014
Amyotrophic lateral sclerosis
opi05022
Pathways of neurodegeneration - multiple diseases
opi05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
101523232 (TNFRSF1B)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101523232 (TNFRSF1B)
04061 Viral protein interaction with cytokine and cytokine receptor
101523232 (TNFRSF1B)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101523232 (TNFRSF1B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101523232 (TNFRSF1B)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101523232 (TNFRSF1B)
05022 Pathways of neurodegeneration - multiple diseases
101523232 (TNFRSF1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
opi04050
]
101523232 (TNFRSF1B)
04090 CD molecules [BR:
opi04090
]
101523232 (TNFRSF1B)
Cytokine receptors [BR:
opi04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
101523232 (TNFRSF1B)
CD molecules [BR:
opi04090
]
Proteins
101523232 (TNFRSF1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
101523232
NCBI-ProteinID:
XP_012785460
LinkDB
All DBs
Position
13:complement(14622490..14650025)
Genome browser
AA seq
463 aa
AA seq
DB search
MAPVALWAALAVGLQLWAAGHGVPTQFTVNPHSPESGDKCQSTQYYDDGVQRCCSKCQPG
HHVKAFCTESSDTVCARCEDSTYTQLWNRVAECFSCSARCSPDQVETQACTWKQNRICTC
KPGLYCMLKKQEGCRLCKALSKYRPGFGVAKPGTAVSDVVCAPCVPGTFSDTTSSTNTCR
PHRICHMVAIPGNASMDALIWVLAPTSGFAANQPXPQPVATTSQHTQPTPGPTIKFSVPL
LMGPSPPAEGLRTGSVCLPVGLIVGVTVFCLLVIGLVNVVILSQKKKKLSCLQREAKVPH
VPADKTRGEPGLEQQHLLTTAPSSSSSSLESSASAADRRTPTKSQPPTPSVDKAPGSGEA
QASCRSSEPAPGGPGGPGTQVNVTCIVNVYSSSDPGSPCSPPAGPAMEDTDGSPSGLSVD
DEQVPFSKEESPFESHPGPPETALQNPEKSLPLGVPDDGLKPS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgtcgccctgtgggccgctctggccgtcggactgcagctctgggccgccggg
cacggcgtgcccacccagttcactgtcaacccccacagcccagagtctggggacaagtgc
caatcaacccagtactatgacgacggggtccagcggtgctgtagcaagtgtcagccaggc
caccatgtgaaagccttctgcactgagagctcagacaccgtgtgcgcccgctgtgaggac
agcacatacacgcagctctggaaccgcgtcgctgagtgcttcagctgcagtgcccgctgc
agccctgaccaagtagaaacccaagcatgcacctggaagcagaaccggatctgtacgtgc
aagccaggcttgtactgcatgttgaagaaacaggagggttgccggctgtgcaaggcactg
agcaagtaccgccccggctttggcgtggccaaaccaggcactgcagtgtcagacgtggtg
tgtgcgccctgtgtcccagggactttctctgatacgacctcatccacgaatacctgccgg
ccccaccggatctgccacatggtggccatccccggcaatgcgagtatggacgcactcatc
tgggttctcgcccccacaagtggctttgcagccaaccagcccnnaccccagccagtagcc
acaacttcccaacacacgcagcctacaccaggacccaccatcaagttctctgttccactt
ctgatgggccctagccccccagctgaggggctccgcaccggcagcgtctgtcttcccgtg
ggactgattgtgggtgtgacagtcttctgcctgctcgttataggactggtgaacgttgtc
atcctgtcacagaaaaaaaagaagctgtcctgcctgcagagagaagccaaggtgcctcac
gtgcctgctgacaagacccggggtgagcccggcctggagcagcagcatctgctgaccaca
gcgcccagctccagcagcagctccctggagagttccgccagcgctgcagacaggaggacg
cccaccaagagccagcccccgacgccgagtgtggacaaggcccctgggtccggggaggcc
caggccagctgcaggagctcagagcccgctcccggaggccctggcggccccggcacccag
gtcaacgtcacctgcattgtcaatgtctacagcagctccgaccctggctcgccctgctcc
cccccggctgggcccgcgatggaggacacagacggcagtccctcgggcctctccgtcgat
gatgaacaggtgcccttctccaaggaagagagcccctttgagtcccacccggggcccccc
gagactgctctgcagaaccccgagaaatccctgcccctcggcgtgcctgacgacggcctg
aagcccagctaa
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