Ochotona princeps (American pika): 101523239
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Entry
101523239 CDS
T07609
Symbol
UBTF
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101523239 (UBTF)
03021 Transcription machinery [BR:
opi03021
]
101523239 (UBTF)
Transcription factors [BR:
opi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
101523239 (UBTF)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
101523239 (UBTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
DUF4473
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
101523239
NCBI-ProteinID:
XP_004597364
LinkDB
All DBs
Position
19:complement(7115688..7128934)
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AA seq
764 aa
AA seq
DB search
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQSAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMASMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
FLESLPEEEQQRVLGEEKMLNINKKPATSPASKKPSQEAGKGGSEKPKRPVSAMFIFSEE
KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGADREERGK
LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPATANSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLR
GPNPKSSRTTLQSKSESEEDDEDDEDDEDEDEEEEDDDNGDSSEDGGDSSESSSEDESED
GDENEEEDEDEDDEEDDEEDEDNESEGSSSSSSSSGDSSDSDSN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaagccgactgccccacagacctggaaatggccgccccgaaaggccaagac
cgctggtcccaagaagacatgttgactttgctggaatgcatgaagaacaaccttccatcc
aatgacagctccaagttcaaaaccaccgaatcacatatggactgggaaaaagtagcattc
aaagacttttcgggagacatgtgcaagctcaaatgggtggagatttctaatgaggtaagg
aagttccgtacgttgacagaattgatccttgatgctcaggagcatgtgaaaaacccttac
aaaggcaaaaaactcaagaaacacccagacttcccaaagaagcccctgaccccttacttc
cgctttttcatggaaaaacgggccaagtatgcaaagctccatcctgagatgagcaacctg
gacctgaccaagattctgtccaagaaatacaaggagcttcccgagaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagtttgagcggaacctggcccgattcagg
gaggatcaccctgacctcatccagagtgccaagaagtcggacatccccgagaagcccaaa
actccccagcagctgtggtacacgcatgagaaaaaagtgtatctcaaagtgcggccagat
gccactacgaaggaggtgaaggactccctggggaagcagtggtctcagctctcggacaaa
aagaggctgaaatggattcataaggccctggagcagcggaaggagtacgaggagatcatg
cgggactacatccagaagcaccccgagctgaacatcagcgaggagggcatcaccaagtcc
accctcaccaaggccgaacgccagctcaaggacaagtttgacggacgacccaccaagcca
cctccgaacagctattcgctgtactgcgcagagctcatggccagcatgaaggatgtgccc
agcacggagcgcatggtgctgtgcagccagcagtggaagctgctgtcgcagaaggaaaag
gatgcctatcacaagaaatgcgaccagaaaaagaaagactacgaggtagaactgctccgt
tttctggagagcttgcctgaggaggagcagcagcgggtcttgggagaggagaaaatgtta
aacatcaacaagaagccagccaccagccctgcctccaagaagccctcccaggaagcgggc
aagggtggctcggaaaaacccaaacggcccgtgtcagccatgttcatcttctcggaggag
aagcggcggcagctgcaggaggagcggcccgagctctcggagagcgagctgacccgcctg
ctggcccgcatgtggaacgacctgtccgagaagaagaaggccaagtacaaggcccgggag
gccgcgctgaaggcgcagtcggagcggaagccaggcgctgaccgcgaggagcggggcaag
ctgcccgagtcgcccaagagggccgaggagatctggcaacagagcgtcatcggcgactac
ctggcgcgcttcaagaatgaccgggtgaaagccttgaaagccatggagatgacctggaac
aacatggagaagaaagagaaactcatgtggatcaagaaggctgccgaagaccaaaagcgc
tatgagcgggagctgagcgagatgagggcgcctccagccactgccaattcttccaagaag
atgaagtttcagggggagcccaagaagccacccatgaatggctatcagaaattctcccag
gagctgctctccaatggggagctgaaccacctgccgctgaaggagcgcatggtggagatc
ggcagccgctggcagcgcatctcacagagccagaaggagcactacaagaagctggctgag
gagcagcagaaacaatacaaggtgcacctggacctctgggtcaagagcctgtctccacag
gaccgtgcagcctataaagagtacatctccaataaacggaagagcatgaccaagctgcgt
ggcccgaaccctaagtccagccggaccacattgcagtccaagtcggagtccgaggaggat
gatgaagatgatgaggatgatgaggacgaggatgaagaagaggaagatgatgataatggg
gactcctccgaggatggcggggactcctccgagtccagcagtgaggacgagagcgaggat
ggggacgagaatgaggaggaagatgaggacgaggacgacgaggaagatgatgaagaggac
gaagacaacgagtcggagggcagcagctcgagctcctcatcatcaggggactcctcggac
tcagactccaactga
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