Ochotona princeps (American pika): 101523241
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Entry
101523241 CDS
T07609
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04066
HIF-1 signaling pathway
opi04137
Mitophagy - animal
opi04140
Autophagy - animal
opi04148
Efferocytosis
opi04659
Th17 cell differentiation
opi04919
Thyroid hormone signaling pathway
opi05167
Kaposi sarcoma-associated herpesvirus infection
opi05200
Pathways in cancer
opi05205
Proteoglycans in cancer
opi05208
Chemical carcinogenesis - reactive oxygen species
opi05211
Renal cell carcinoma
opi05230
Central carbon metabolism in cancer
opi05231
Choline metabolism in cancer
opi05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
101523241 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101523241 (HIF1A)
04137 Mitophagy - animal
101523241 (HIF1A)
04148 Efferocytosis
101523241 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101523241 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
101523241 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101523241 (HIF1A)
05205 Proteoglycans in cancer
101523241 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
101523241 (HIF1A)
05230 Central carbon metabolism in cancer
101523241 (HIF1A)
05231 Choline metabolism in cancer
101523241 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
101523241 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
101523241 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
101523241 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101523241 (HIF1A)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101523241 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
NinG
Motif
Other DBs
NCBI-GeneID:
101523241
NCBI-ProteinID:
XP_004597684
LinkDB
All DBs
Position
20:complement(29097206..29136171)
Genome browser
AA seq
819 aa
AA seq
DB search
MEDAGGANDKKNRISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDVEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSHPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESADASCLFDKLKKEPDALTLLAPAAGDTIISLDFGSSDTE
TEQQEEVPLYNDVMFPSSNEKVQNINLAMSPLPASESPKPLRSSADPVLNEEIVLKLEPN
PESLELSFTMPQIQDQPASPSDGSTRQSSPEPTSPSEYCFDVDSDMVNVFKLELVEKLFA
EDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSTSPQAVSAVTAFQQ
TPMQEPSTNTATAKEVKTETKDSLEDIKVLIACPSPTHIPKETASATTSAPYSGTQSRTA
SPNTAGKGVIEQTEKSHPRSPNLLSVTLSQRTAAPEEELNPKIIALQNAQRKRKMENDGS
LFQAVGIGTLLQQPDDRATATSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLLGQSM
DESGLPQLTSYDCEVNAPVQGSRNLLQGEELLRALDQVN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccggcggcgcgaacgacaagaaaaataggatcagttctgaacgtcgaaaa
gagaagtctagagatgcagcccgatctcggcggagcaaagagtctgaagttttctatgag
cttgctcatcagctgccactcccccataatgtgagctcgcatcttgacaaggcttctgtt
atgaggcttaccatcagctatctgcgtgtgaggaaacttctggatgctggtgatctggac
gttgaggatgagatgaaggcgcagatgaactgcttttatctgaaagccctggatggtttc
gttatggttctgacagatgatggtgacatgatttacatttctgataatgtgaacaaatac
atgggactaactcagtttgaactaactggacacagtgtgtttgattttactcatccgtgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggtcctgttaaaaagggcaaa
gagcaaaacacacagcgaagcttctttctcagaatgaagtgtacactaactagccggggg
aggaccatgaacataaaatctgcaacgtggaaggtgcttcactgtacaggccatattcac
gtgtacgataccaacagtaaccagtctcagtgtggttacaagaaaccgcccatgacatgc
ttggtgctcatttgtgaacccattcctcatccgtcaaatattgaaattcctttagatagc
aagacatttctcagtcgacacagcctggatatgaagttttcttactgtgatgaaagaatt
actgaattgatgggatatgagccagaagaacttttgggccgctcaatttatgaatattac
catgctttggactctgatcatctgaccaaaactcatcacgatatgtttactaaaggacaa
gtgaccacaggacagtacaggatgcttgccaaaagaggtggatacgtctgggttgagact
caagcaactgtcatatataacaccaagaattctcacccacaatgcattgtatgtgtcaat
tacgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagtggaa
tcagcagatgcaagctgcctctttgataaactgaagaaggaacctgatgctctaactctc
ctggccccagctgctggagacacaatcatatctttggattttggcagcagtgacacagaa
actgaacaacaggaggaagtcccattatataatgacgtaatgttcccctcatccaatgaa
aaggtgcagaacattaacttggcaatgtctccattacctgcctctgaatctccaaagccg
cttcgaagtagtgctgaccctgtactcaatgaagaaattgtactgaaattagaaccaaat
ccagagtcactagaactttctttcaccatgccccagattcaagatcagccagcaagccct
tctgatggaagcaccagacaaagttcacctgagcccaccagtcccagtgaatattgcttt
gatgtggacagtgacatggtcaatgtattcaagttggaattggtagagaagctttttgct
gaagacacagaagcaaagaatccattttctacccaggacaccgatttagacctggagatg
ttagccccctacatcccgatggatgatgacttccagttacggtccttcgatcagctgtca
cctttagaaagcagttctacaagccctcaggctgtgagcgcagtgacagcattccagcag
actccgatgcaggaaccttccactaacaccgccaccgccaaggaagtgaaaacagagaca
aaagacagtttggaagacattaaagtgctgattgcatgtccatctcctacccacatacct
aaagaaactgctagtgccacaacatcagcaccatacagtggcactcaaagtcggacagcc
tcaccaaacacggcaggaaagggagtcatagaacagacagaaaaatcgcatccaagaagc
cctaacttattatctgtcacgctgagtcaaagaactgctgctcctgaagaagaattaaat
ccaaagataatagctttgcagaatgctcaaagaaagcgaaaaatggaaaatgatggctcg
ctttttcaagcagtaggaattgggacattgttacagcagccagatgatcgtgcgactgct
acatcactttcctggaaacgtgtaaaaggatgcaaatctagtgaacagaacggaatggag
caaaagacaattatcttaataccctctgatctagcatgcagactgctggggcaatcaatg
gatgagagtggactaccgcagctgacgagttatgattgtgaagttaatgctcctgtacaa
ggaagcagaaacctactgcagggtgaagaattactcagagctttggatcaagtcaactga
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