Ochotona princeps (American pika): 101523265
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Entry
101523265 CDS
T07609
Symbol
ZCCHC2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
101523265 (ZCCHC2)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
101523265
NCBI-ProteinID:
XP_012786913
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All DBs
Position
9:complement(10935483..10998172)
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AA seq
1234 aa
AA seq
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MPARAPSLRSPTRRVPRRPGRCGGAGRWDGQSRGEPAARPEPGERRSCALLASDVGPARC
PPRSVCPRRGRPARGADLRTARKPRRGRWPGSSWAWPFREGRPRRGGEGTSPSASGADWL
RCGARNRKPLGPLGPHGPRQLVRGTAEAPPPPQLRADDGWFGLVLGSAQRLEFMCGLLDL
CNPLELRFLGSCLEDLARKDYHYLRDSEAKANGLSDPGPLADFREPAVRSRLIVYLALLG
SENREAAGRLHRLLPRVDAVLKSLRAARAGADGDAEQDGSGPEGGGAESRAAGGLGSRAQ
EELLLLFTMASLHPAFSFHQRVTLREHLETLRSALRGGPGEAEPAGPRPQVTRRARARAP
AGRAERSGRVWCRGGTRSGVRLRQPRARLRGAGGLAVWPCPLPRGARRQRLDELDMKQNN
LHPVLKMNYLLLPKELSSETFDKTILRALNQGSMKREERRHPDLEPILRQLFSTSSQAFL
QSQKVRSFFQSLSPDSLHSLNNLQSSLKTSKILEHLKEDSSEASSQEEDVLQHSLIHKKH
TGKSPIVNNIGTNCSPLDGLTMQYSEQNGVVDWRKQNCTTMQHPEHCVTLADQHSAEKRN
MASISKKKGKSQIEKEKMKKADNRLNSRINGLRVSAPQHAHGGPVEGRRSVLSAAQLGVS
SADRCAAGLGQPSRTVTAVVLTSHPALLVPVVTPERIAKQKSPAFLDNPDIKYTDSNSED
SGNPSTARFTGYGSVNQTVTVKPTVQIAGLGNENGNLLEDPLSSPKYPPIPFMPTLHCVM
HNGAPKAEVVIPASKSTDGKTLSMLVPRPVAISAVRESASAAPVGILGPTAPTGEAEKHR
DLLVPPLPTPSTFLPHGSAPTLHPPFQGLKSPPPQGSAENCTVNIPQQPTASLSIGSPTT
AFIHVHSPGGFPGSPVTATDPIAKSAPPVGGLNQMVPQIEGSTGTAPQPTNVKVVLPAAG
LSAAQPPAPYTLPGSPLAASVLPTPSSSVLSPAATSAQPVSAGLSQAQATVPAAVPTHTP
GPAPSPSPALTHSTAQSDSTPYISAGGSSSANGTVVPPAPQQMGSGPCGSCGRRCSCGTN
GNLQLNSYYYPNPVPGPMYRVPSFFTLPSICNGSYLSQAHQSNGNQLPFFLPQTPYANGL
VHDPVMGSQASYGLQQMAGFGRFYPVYAAPNGVASASGSGPKKNATVSCYNCGVSGHYAQ
DCKQSSMEANQQGTYRLRYAPPLPPPSDPLDSAD
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcgcgcgccctcgctgcgctccccgacccgccgcgtccctaggcggcccgga
cgctgcggcggcgccggacgctgggacgggcagagccgaggggagccagcagcccggcca
gagcccggcgaaaggcgcagctgcgcgctgctcgcctctgacgtggggcccgcacgctgc
cctccgcgctccgtttgccctcgccgcggccgcccggcccggggcgcagaccttaggacc
gcgaggaagccccgaagagggaggtggccgggcagcagttgggcgtggcctttccgcgag
gggcggccccggcggggcggggaaggtacgtcaccgtcggcttcgggcgctgattggctg
cgctgcggtgcgcgaaaccgcaagcctctcggcccgctcggcccgcacggccctcgccag
ctcgtgaggggaaccgctgaggcgccgccaccgccccagctcagggcggacgacggctgg
ttcgggctggtgctgggctcggcgcagcgcctcgagttcatgtgcgggctgctggacctg
tgcaacccgctggagctgcgcttcctgggctcgtgcctggaggacctggcgcgcaaggac
taccactacctgcgcgactcggaggccaaggccaacggcctctcggacccgggcccgctg
gccgacttccgagagcccgccgtgcgctcgcgcctcatcgtctacctggcgctgctgggc
tcggagaaccgcgaggcggccggccgcctgcaccggctgctgccccgcgtggacgcggtg
ctcaagagcctgcgtgcggcccgggccggcgcggacggcgacgccgagcaggacggctcg
ggccccgagggcggcggcgccgagtcccgggcggccggcgggctgggctcccgggcgcag
gaggaactgctgctgctcttcaccatggcctcgctgcacccggccttctccttccaccag
cgggtcaccctgcgggagcacctggagacgctgcgctcggcgctgcgcggcggccccggc
gaggcggagccggccggccccaggccccaggtaacgcgccgggcccgcgctcgagccccg
gccggccgcgcggaacgctctggaagggtctggtgccggggtggtaccaggagcggggtg
cgcttgcgacagccgcgagccaggctgcgtggtgcgggcggcctggcagtgtggccgtgc
cctcttccccggggtgcccgccgacagcggttggatgagttagatatgaagcaaaataac
ttgcatcctgtcttgaagatgaattatctcttgcttccaaaggagttgtcttcagagact
tttgataagaccatcttaagagccctgaatcagggttccatgaaaagggaagaacggcgg
caccctgacctggagcccatcctaaggcagctattttcgacttcatcgcaagcttttctg
cagagtcagaaagtgcgcagctttttccagtccctgtcgccagactcgctgcacagcctc
aataacttacagtcctctctgaagacttcaaaaatattagaacacttgaaagaagacagc
tcggaagcttcaagtcaagaagaagatgtgttacagcattccctaatccacaagaaacat
accgggaaaagtcccattgtaaacaacattggtacaaattgttctccgttggatgggctt
accatgcaatattctgaacagaatggagttgtggactggcggaagcaaaactgcaccacc
atgcagcacccagagcactgtgtgaccttggctgaccaacattctgctgaaaagcggaac
atggcttcaataagtaagaagaaaggaaagtcacaaatagaaaaggagaaaatgaaaaaa
gcggataacagattgaatagcaggataaatggtctgagagtgtctgctcctcaacatgcc
catggtggtcctgtggaaggaaggcggtctgttctcagcgcagcccagctcggtgtgtct
tctgcagacagatgtgcggctggtctcgggcaaccgtcacgaactgtcactgctgtggtc
ctcacctcccaccccgctctgctggtgccagttgtgacaccagaaagaattgcaaaacaa
aaatctccagctttcttagataacccagatattaaatacacagacagcaactctgaggat
tctgggaatccatcaacagccaggttcacaggttatggctctgtcaaccagactgtcacc
gtcaagccaactgttcagattgctggcctaggaaatgagaatggaaacctcttagaagat
cccttaagctcacccaagtacccccccattccttttatgccaactttacactgtgtcatg
cacaatggtgccccaaaggctgaagttgtcatccctgcctccaaatctactgacggcaaa
accctgagcatgcttgtacccaggcctgtagctatttctgcagtcagggagtcggccagt
gcagcgcctgtgggaatcctgggacccacagcccccactggagaagcagagaagcaccgt
gacctgctggttccccctttacccaccccctccaccttccttccccatgggagtgctccc
acattgcacccaccatttcaggggctaaagtcgccaccgccacaggggtctgctgagaat
tgcacggtgaatatcccccaacagccaacagcaagcctgagcatcggatcaccaaccact
gcctttattcatgtccatagccccgggggcttcccaggatctcctgtgactgccacggac
cccatcgccaagtctgcacccccagtgggaggactgaatcaaatggtgcctcaaattgag
ggaagcacagggacagcccctcagcctaccaatgtgaaggtagttcttccagcagctggc
ctctcagctgcccaaccaccagctccctacaccttgccgggctcgcccctcgctgccagc
gtgctccccaccccaagttccagcgtgctcagcccagccgccacgtcggcacagcccgtg
agtgcaggcctcagccaggcccaggcaactgttcctgctgccgttcccacccacacgcca
ggtccggccccaagccccagccccgccctgacccacagcaccgcgcagagtgacagcacg
ccatacatcagcgccggggggagctcgagtgctaacgggacagtggtgccaccagcgccg
cagcagatgggttctggtccatgtggctcttgcgggcgcaggtgcagctgtgggaccaat
ggaaacctgcagctcaacagttactattaccccaacccagtgcccgggccaatgtaccga
gtcccatccttcttcaccctgccatccatttgtaatggcagctacctcagccaagcacat
cagagcaatggaaaccaacttcccttttttctgcctcagactccatatgcaaatggactg
gtgcatgacccagtcatggggagccaggccagctacggtttgcagcagatggcaggattt
gggaggttctaccccgtctatgcagcacccaatggagttgccagcgccagcggttcgggg
cccaagaagaatgccactgtgtcctgttacaactgtggtgtgagcggacactatgcccag
gactgtaagcagtcgtccatggaggccaatcagcaaggcacttacagactgagatacgca
cctcccctcccccctcctagtgatccgttggattctgcagactga
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