Ochotona princeps (American pika): 101523306
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Entry
101523306 CDS
T07609
Symbol
FBXO42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101523306 (FBXO42)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101523306 (FBXO42)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_5
Kelch_1
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
101523306
NCBI-ProteinID:
XP_004592390
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All DBs
Position
13:11385307..11483447
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AA seq
775 aa
AA seq
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MWAARGPASCEEPRARPARPEARAPLLWPCSRLSHHRCRRSEPESVERAGPAAYWNVMAS
FSDSEDDSFMAVDQEITVLDGTLEQDEEPHPVLAVEEARPDRSMAELPEEVLEYILSFLS
PYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRFSHS
ACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYK
DLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDK
MIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCG
GPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAP
LSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPAGS
REGSLSPARGDGSPVLNGGSLSPGTVAAGGGSSLDSPLQALSPSTPSAAEGYDLKMGLSA
GPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPLDGVDNRTAGGGGRHPPDQTNGVHTPPH
VASALAGAVSPGTLRRSLEAIKAMSSKGPSASAALSPPLGSSPGSPGSQNLSSGDMVPVS
RPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIRDTKEKGRVKW
KVFNSTSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggctcggggtcccgccagctgtgaggaaccccgagcgcggcccgcgcggccc
gaggcaagagcgcctcttctctggccctgttctcggctctctcaccaccgttgccggcgg
agcgaacccgagagcgtggagcgggccgggccagctgcctattggaatgtcatggccagc
ttctcggacagtgaagatgacagtttcatggctgtggaccaagaaataactgtgctggat
gggaccctggagcaagatgaggagccccaccctgtgctggcagttgaggaggctaggcct
gacaggtccatggctgagctgccggaagaggtgctggagtacatcctgtccttcctctca
ccctatcaggaacacaaaaccgcagcccttgtctgcaaacagtggtatcgactgatcaaa
ggtgttgcccaccagtgttatcatggcttcatgaaggctgtgcaggaaggaaacattcag
tgggagagccggacatatccttaccctggaacccccatcacacagcgcttctcacacagt
gcgtgctattatgatgctaaccagtccatgtacgtgtttggaggctgcacgcagagcagc
tgcaatgctgccttcaacgacctctggagacttgacctaaatagcaaagagtggatccga
cctttggcttcagggtcctatccttcccccaaggctggcgcgactctggtcgtgtacaag
gacttgcttgtgctgtttggtggctggacacggccaagcccctatcccctacaccaacca
gagagattttttgatgaaatacatacttactcaccctctaaaaactggtggaattgcatt
gtgacaacccatggaccacctcccatggctggccactcctcctgtgtgattgatgataaa
atgatcgtctttggtggctctttagggtcccggcaaatgagcaacgatgtctgggtcctt
gacctcgagcagtgggcgtggtccaagccgaacatctcaggccccagtcctcatccccga
ggtggccaatctcagattgtcatagatgatgcaactatcttaattcttggaggttgtggc
ggtcccaatgctctgttcaaggatgcttggttactgcacatgcactcgggtccctgggcc
tggcagccactcaaggtggaaaacgaagatcatggggcccccgaactgtggtgccatcca
gcttgccgggtgggacagtgtgtggtggtcttcagccaggctcccagtgggagagcccca
cttagccccagtctgaattctcgcccatcacccatcagtgccactcctccggctctggtt
ccagagacccgagagtaccgctcccagtcgccagtgaggagcatggatgaagcgccttgt
gtcaacggccgctgggggaccctgaggccccgggctcagaggcagactccggcaggctct
cgagaagggagcctgtcccccgccaggggagatggctcacctgttctcaacggtggcagt
ttgtctccgggaacagttgctgctggcggcgggtcttccctggacagcccccttcaggcc
ctgtctccgagcacaccgtctgctgctgaaggatacgacctgaagatggggctctctgca
ggcccccgacgagggtcactcccagatcagaaagatctgagactaggatcaattgatcta
aactgggacctgaaacctgcctctagtagcaatcccttggatggtgtggacaacaggaca
gccgggggaggcgggagacaccctccggaccagaccaatggtgtgcacacaccgccgcac
gtggccagtgcccttgcaggggccgtctctccaggcaccctgcgtcgcagtctagaggcc
atcaaagcgatgtcgtccaagggcccctcagcctccgcggcactaagtcctccactgggg
tcttcccccggctcccctgggagccagaacctaagcagtggtgacatggtgcctgtctcc
cgcccagggcctgcccagggagatggacattccttacctcccattgcccgccgcctgggc
caccatcctccccagtccctgaatgttggcaaacccctgtaccagagtatgaactgtaag
ccgatgcagatgtacgtgctggacattagagacactaaggagaaggggcgggtcaagtgg
aaagtgttcaacagcacatctgtggtcggtcctcctgaaaccagcctgcacacagtggtg
caaggcaggggtgagctcatcatcttcggaggactcatggacaagaagcagaatgtgaag
tactatcccaaaacaaacgccttgtactttgtgcgagcaaagagatag
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