Ochotona princeps (American pika): 101523413
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Entry
101523413 CDS
T07609
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03022
Basal transcription factors
opi05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101523413 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101523413 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101523413 (TAF4B)
03036 Chromosome and associated proteins [BR:
opi03036
]
101523413 (TAF4B)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101523413 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
101523413 (TAF4B)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101523413 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
101523413
NCBI-ProteinID:
XP_004579635
LinkDB
All DBs
Position
9:36018919..36111614
Genome browser
AA seq
860 aa
AA seq
DB search
MPAGLTEPAGAAPSAVGSASGTVTMAPAGTVPLRVESAPLAGVTKRPVGVCADPSASQQP
LRSPVGTVVTKVAPVSALPQPGGSRLPAPQIVAVKTPNTTTIQLPANLQLPPGTVLIKSN
SGQLMLVSPQQAVTRSEATTNAPSRPAVPANTQTVKICTVPNSSSQVIKKVALAPVKKLA
QVGTTVVTTVPTSSSVQSMAVPTNTVTVTPAKPLNTVTTLKPLSVGTSSTSSNEPSLKME
GPASAQTTLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEE
FTKKLYVELKSSPQPHLVPFLKKSVIALRQLLPNAQSFIQQCVEQTSCEGVIATCTTAVT
TAPAVTTTVSVIQPEKPIVVSAAAAPRAVSVQTLNTLAGADGVKPGVVTLHSVGPATVQG
GTAAGSVLLQTSKPLVTSIPNTVTTVPLQAEKPVASGAAVTLALPSVAFRETSATALCLP
SVKPVVTPAGSTSDKPVVGAPVHIKIAQPSPALSQPTGVPQAVKVKQLVVQQPSGGFAKQ
APTLAHSSALSIQKSGQKKMPVNTVIPTSKFPSASILKQITLPGNKILSLQAPTIQKHKI
KENGATCFRDEDDINDVTSMAGVNLQEENACILATNSELVGTLIQSCKDEPFLFIGALQK
RILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSSDT
RSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQ
HRDANLTALAAIGPRKKRPLESASEGLKDYILPSGTTSLTATKQLLRPRITRVSLRDLIF
CMEQEREMKYSRALYLALLK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggcctcaccgaaccggcgggcgccgctccctcagccgtcgggagcgcctca
gggaccgtgaccatggcccccgccgggactgtgccgctccgggtggagagcgcgcccctg
gccggcgtgacgaagaggcccgtcggtgtctgcgccgatccctcggcgtctcagcagccc
ctgcggtccccggtggggaccgtggtgaccaaggtggctcctgtcagtgcgcttcctcaa
cccggcggctctaggctgcccgcgcctcagatagttgcggtgaaaacccccaacaccacg
accatccagttgccggctaatttgcagcttcctccaggaacagttttgatcaaaagtaac
agtggtcagttgatgttggtatctccccagcaagctgtgacaagatctgaggccacaact
aatgcaccttcaaggccagcagtaccagcaaatactcaaacagtcaaaatctgtaccgtg
ccgaactctagttcacaagtaatcaagaaagtggcattggcacctgttaaaaaattggca
caagtaggaactactgtggtaaccactgttccgacgtcttcctcagtacaatccatggct
gtgccaaccaatactgtcacagtaactcctgccaagccgttgaacacagtaactactctg
aaacctttaagtgtgggaacatcatccacctcctcaaatgagcccagtctgaaaatggag
gggccagcaagtgctcagaccactctttctccaacaatgctggaaaatgtgaagaaatgt
aagaactttcttgcaatgttaatcaaactagcatgtagtgggtcacagtccccagaaatg
gggcaaaatgtgaagaagcttgtggaacaacttttggatgcaaaaattgaagcggaagag
tttactaagaaactgtatgttgaactgaagtcttcacctcagcctcacctagttcctttt
cttaagaaaagtgtgattgccttacgacagcttctacctaatgcccagagcttcattcag
cagtgtgttgagcagacctcttgtgagggtgtcattgccacctgtaccacagcagtgaca
actgctcccgcggtgacgactacagtttccgtcattcagcctgaaaagcccattgtggtt
tctgcagcagcagcacccagagctgtgtcggtgcagactctgaatacacttgctggtgca
gatggagtaaaacctggagttgtgactcttcattctgtgggtccagctactgtacaagga
ggaacagcagctggaagtgttttgcttcaaacttcaaaaccacttgtgacatctatacca
aatacagttacaacggtcccacttcaggctgagaagccagttgcctctggagcagcagtg
accctggcccttccttcagtagcttttcgagaaacttcagctacagctctttgtcttcca
tctgtaaaacctgttgttactcctgctgggagcacatctgacaagcctgttgttggcgct
ccggtccacatcaaaattgcccagccgagccctgctctttcacagccaactggggttcca
caggcagtcaaagtcaagcaactagtggtccagcagccttcaggaggctttgcaaaacaa
gcgcccacacttgcccattcctcagcgttgagcattcagaaatctgggcagaagaagatg
ccagtgaacaccgtaatacctaccagtaagttcccttcagcttctattctaaagcaaatt
actctgcctggaaataaaattctgtcgcttcaagcacctactattcagaaacataaaata
aaagagaatggagcaacatgcttcagagatgaggatgacatcaatgacgtgacttccatg
gcaggggtcaacctccaggaagaaaatgcctgcatattagcaacaaactctgaactggtt
ggcacactcattcagtcatgtaaagatgaaccatttcttttcattggagctcttcaaaaa
agaattttagatattggtaaaaagcatgacattacagaacttaactctgatgctgtgaac
ttgatctcccatgcaacgcaggagagattacgaggccttttagaaaaattgaccacaatt
gctcagcatcggatgactacttacaaggcaagtgaaaattacatcctgtctagtgatacc
aggtcacagcttaaatttcttgaaaagctggatcaattggagaaacagagaaaggattta
gaagaaagagaaatgttacttaaggcagccaagagtcgttccaataaagaagacccggaa
cagctgagattaaagcagaaagccaaagagttacagcagttggaacttgcacagatacag
cacagagatgctaatctcacagctcttgcagctattggaccaaggaagaagagaccacta
gaatctgcaagtgagggcttaaaagactacattcttccttctgggacaaccagcctaaca
gccaccaagcagttgcttcgtccaagaatcacaagagtcagcctcagggatttgatattt
tgcatggaacaggaaagagagatgaagtattcccgagctctgtacctggcccttctgaag
tga
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