Ochotona princeps (American pika): 101523523
Help
Entry
101523523 CDS
T07609
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101523523 (SOX12)
Transcription factors [BR:
opi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101523523 (SOX12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
101523523
NCBI-ProteinID:
XP_004586059
LinkDB
All DBs
Position
4A:complement(19002646..19003613)
Genome browser
AA seq
244 aa
AA seq
DB search
MVQQRGARAKRDGGPPPPPGPGSTEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIM
DQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAP
AKARPRPPGGGGPSGEGAAAPAVVAASPPPSEDEEPEEEEEEAAPAEEGDEETVASGDEP
LGFLSRLPPGPVGLDCSALDRDPDLPPPSGTSHFEFPDYCTPEVTEMIAGDWRPSSIADL
VFTY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagcggggcgcgagggccaagcgggacggcgggccgccgccgcccccgggg
cccgggtcgaccgaggaaggggcgcgtgagcccggctggtgcaagaccccgagcggccac
atcaagaggccgatgaacgcgttcatggtgtggtcgcagcacgagcggcggaagatcatg
gaccagtggccggacatgcacaacgccgagatctccaagcgcctgggccgccgctggcag
ctgctgcaggactcggagaagatcccgttcgtgcgggaggcggagcggctgcgcctcaag
cacatggcggattacccggactacaagtaccggccgcgcaaaaagagcaagggggcgccc
gccaaggcgcggccccgcccccccggcggcggcgggccgtcgggagagggggcggccgcc
cccgccgtcgtcgccgcctccccgccgccgtcggaggacgaggagccggaggaagaggag
gaagaggcggccccggcggaggagggcgacgaggagacggtggcgtcgggggatgagccg
ttgggctttctgtccaggctgcccccgggccccgtcggcctggactgcagcgccctggac
cgcgatccggacctgccgcccccttcgggcacgtctcacttcgagttcccggactactgc
acccccgaggtgaccgagatgatcgcgggggactggcgcccgtctagcatcgccgacctg
gttttcacctactga
DBGET
integrated database retrieval system
