Ochotona princeps (American pika): 101523572
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Entry
101523572 CDS
T07609
Symbol
RUBCN
Name
(RefSeq) LOW QUALITY PROTEIN: run domain Beclin-1-interacting and cysteine-rich domain-containing protein
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101523572 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101523572 (RUBCN)
Membrane trafficking [BR:
opi04131
]
Autophagy
Other autophagy associated proteins
Others
101523572 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
101523572
NCBI-ProteinID:
XP_036350725
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All DBs
Position
14:29507440..29568212
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AA seq
1012 aa
AA seq
DB search
MRPEGAGMDLRGCEERLPEESRREHWQLLGNLKTTVEGLVSANSPNVWSKYGGLERLCRD
MQSILYHGLIHDQVCCHQTDYWQFVKDIRWLSPHSALHVEQFINLYENGQSSADGVSERA
IAELWLQHSLQFHCLSAQLRPLLGDRQYIKKFYTDTAFLLSDAHVTAMLQCLEAVEQNNP
RLLAQIDASMFARKHESPLLVTKSQSLTALPGSTCTPPASYAQHSYFGSFSSLHQSMPSH
NAERRSTSFSLSGPPWKPQESRGHVAPAEDPTGQTPQASVSALSGESPTTSQEMSSSTLT
SPVEASWVSNQNNFSNDANEGPEYLAIGNQDPHSRTASCQSHSSNNESSSSNLFSSNSSQ
KPDSAASSLGDQEGSEQSRMSSVLRRSSFSEGQTLPVTSGTKKSHTRSHSDTNIASRGAP
GGPRNITIIVEDPIAESCNEKLKLRGALSYSGQSSEVSTPSSLYMEYEGGRYLCSGEGMF
RRPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNMMSQCLEEDQVEE
EDSDREIQELKQKIRLRRQQIRTKNLFPMYQEAEQGSFRITSSSSQFSSRDSAQFSDSGS
AEEVDDFEIQVGSIGSNLSYMXEEWLSMSVASMFSDAVIKRSTASNGKGFTSSQSFSHSF
LHSTSAEAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGQHADV
YKLRIRVRGNLEWAPPRPQIIFNVHPAPTRKIAVAKQNYRCAGCGIRTEPDYIKRLRYCE
YLGKYFCQCCHENAQMVIPSRILRKWDFSKYYISNFSKDLLLKIWNDPLFNVQDINSVLY
RKIKQLNQVRLLRIQLCHMKNMFKTCRLAKELLDSFDTVPGHLTEDLHLYSLNDLTATKK
GELGPRLVELTRAGAAHVGRCMLCQAKGFICEFCQNEDDIIFPFELHKCRTCEECKACYH
KACFKSGSCPRCERLQARRELLAKQSLESYLSDYEEEPTEALALEATVLETT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgcggccggagggcgcgggaatggatctccgtggctgcgaggagcgcctgccggaggag
agcaggagagagcactggcagttgctgggtaatttgaagactactgtggagggtttggtg
tcggccaacagccccaacgtctggtctaagtatggcggtctggaacggctgtgccgggac
atgcagagcatcctctaccatggtctcatccatgaccaggtgtgttgccaccagactgat
tactggcagtttgtgaaagatatccggtggctcagtccgcactcagccctccatgtagag
cagttcatcaacttgtacgagaatggccagagcagtgctgatggtgtgagcgagcgtgcc
attgcagagttgtggctacagcacagtttgcagttccactgcctctcggcccagctccga
cctctgcttggggacagacagtatatcaaaaagttctacacagatactgctttcctatta
agtgacgcccatgtcacagccatgctgcagtgcctggaagcagtggaacagaacaacccc
cgcctgctggctcagatcgatgcatctatgtttgccagaaagcacgagagcccactgctg
gtgacaaagagccagagtctgacagctctgcctgggtccacatgcacccctccagccagc
tatgctcagcattcctattttgggtccttctcaagcctccaccagtccatgcccagccac
aatgcagagagaagatctacttccttttcactctctggccctccctggaaacctcaagaa
agcagggggcatgtcgcaccagcagaggacccaaccggccagacgcctcaggcttcagtg
tctgcactgtctggggagtcccccacaacctcacaggagatgagctccagcactctgacc
agccccgtagaagcatcatgggtcagcaaccagaataatttctcaaatgatgccaatgag
gggcccgagtatctggccattggcaaccaggaccctcatagccggactgccagctgtcag
agtcacagcagcaacaatgagagcagcagttccaacttgttttcctccaacagctcccag
aagcccgattctgctgcttcttccttaggcgatcaggagggaagtgagcaaagccggatg
tccagtgtccttcgtaggtccagcttctcagaggggcagacactgcctgtcaccagcggg
acgaagaagagccacactcgctcccattcagataccaacattgcctccagaggagcccca
ggaggccccaggaatatcaccattatagttgaagatcccattgcagaatcctgcaatgag
aagttgaagttgagaggtgccttgtcctactctggccaaagcagtgaagtcagcacaccc
agctctctctatatggagtatgagggtggtcggtacctgtgctcaggagaaggcatgttc
cgcagaccctcagaaggacagtccctcatcagctacctgtccgagcaggactttggcagc
tgtgcagacctggaaaaggagaatgcccactttagcatctcagagtctctgattgccgcc
attgagctcatgaagtgcaacatgatgagccagtgcctagaagaggaccaagtcgaggag
gaggacagtgaccgagagatccaggaattgaagcagaagatccgcctccggcgccagcag
atccgcaccaagaatctgttccccatgtaccaggaggctgagcaagggagtttccggatc
acctccagcagctcccagttcagttcacgtgattcagcacagttctccgactctggctct
gctgaggaagttgacgattttgaaatccaagttggtagcataggatctaatttatcttac
atgnntgaagaatggctgtccatgtctgtggcctccatgttctcagatgctgtcatcaaa
aggagcacagcctcaaacggcaaaggcttcacttcctctcagtccttctcccacagcttc
ctgcactccacatctgctgaggcagtggccatgggcctcctcaagcagtttgagggcatg
cagcttccggctgcctcggagctggagtggctagtcccagagcatgatgccccacagaag
ctcctgcccatccccgactcgctgcccatctcaccagatgatgggcagcacgctgacgtc
tacaagctgcgtattcgtgtccgtggcaacctggaatgggccccgccccggcctcagatc
atctttaatgttcatccagcccccacgaggaagattgccgtggccaagcagaattaccgc
tgcgcgggatgtggcatccggaccgaaccggattatatcaagcggctgcggtactgtgag
tacttgggcaagtacttctgtcagtgctgccatgagaacgcccagatggtcatccccagc
cggatcctgcgcaagtgggacttcagcaagtactacatcagcaatttctccaaggacctg
ctccttaagatctggaacgaccctctcttcaatgtgcaggacatcaacagcgtcctctat
aggaagatcaagcagctcaatcaagtccgactgttgaggatccaactctgtcacatgaag
aacatgttcaagacctgccgactggcgaaagaactcctggattcttttgacacagtccca
ggccacctgacggaagatctacacctgtactcactcaacgacctaactgcaaccaagaag
ggggagctgggaccccggcttgttgagctcaccagggcaggggccgcccacgtagggcga
tgcatgctctgccaggccaagggcttcatctgcgagttctgtcagaatgaagacgacatc
atctttccttttgagctccacaagtgccggacctgtgaagagtgcaaagcatgttaccat
aaagcgtgtttcaagtccggcagctgtccaaggtgtgagcggctgcaggcccggagggag
ttgctggccaagcagagcctagagtcctacctgtcagactatgaggaggagcccactgaa
gctttggccctggaagccaccgtcttggagaccacgtga
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