Ochotona princeps (American pika): 101523757
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Entry
101523757 CDS
T07609
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101523757 (CTCF)
03036 Chromosome and associated proteins [BR:
opi03036
]
101523757 (CTCF)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101523757 (CTCF)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101523757 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
101523757
NCBI-ProteinID:
XP_004584008
LinkDB
All DBs
Position
5:36579529..36630911
Genome browser
AA seq
728 aa
AA seq
DB search
MEGEAVEGIVEESETFIKGKERKTYQRRREGGQDEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLTESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSAENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRT
NQPKPNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAAADAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagtcgaaggcattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaggacgaagatgcatgccaccta
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtgcagatg
gtaatgatggagcagctggatcctacccttcttcaaatgaagactgaagtaatggagggt
gcagtggctccagaagcagaggctgctgtggacgatacccagatcataaccttgcaagtt
gtaaatatggaggaacagcccataaacataggagaacttcagcttgttcaagtacctgtt
cctgtaactgtacctgttgccaccacttcagtagaagaactccagggggcttatgaaaat
gaagtgtctaaagagggccttacagagagtgaacccatgatatgtcacactttacctttg
cctgaggggtttcaggtggtgaaagtgggggccaatggagaggtggagacactagagcaa
ggggaacttccgcctcaggaagatcctagctggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaattgcgttacacagaagagggcaaagat
gtggacgtgtctgtctacgactttgaggaagaacagcaggaggggctgctgtcagaggtt
aatgctgagaaagtggttggtaatatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacgtgtccacggcgctcaaat
ttggatcgtcacatgaaaagccacactgatgagagaccacacaagtgccatctctgtggc
agagcgttcagaacagtcaccctgctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgaccagcggagaattggtgcggcat
cgtcgttacaaacatacccacgagaagccatttaagtgttccatgtgtgattatgccagt
gttgaagttagcaaattaaaacgtcacattcgttctcatactggagagcggccgttccag
tgcagcttgtgcagttacgccagcagagacacatacaagttgaaaaggcacatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccagagtgga
accatgaagatgcacattttacaaaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtaatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctatattgaacaaggcaagaagtgccggtactgcgatgcggtgtttcacgagcgctat
gccctcatccagcatcagaagtcacacaagaatgagaagcgctttaagtgtgaccagtgt
gattacgcttgtagacaggagaggcacatgatcatgcacaaacgcacccacactggagag
aagccttacgcctgcagccactgcgacaagaccttccgccagaagcagcttctcgacatg
cacttcaagcgctaccatgaccccaactttgtccctgcggccttcgtctgttctaaatgt
gggaaaacatttacacgacggaataccatggcaaggcatgctgataattgcgctggtcca
gatggtgtagaaggggagaatggaggagagacgaagaaaagtaaacgtggcaggaaaagg
aagatgcggtcaaaaaaagaagattcctctgacagtgcagaaaatgctgagcctgatctg
gatgacaatgaggatgaagaggaacctgctgtggagattgagccagagccagagcctcag
cctgtgaccccagcccccccacctgccaagaagcggagaggacggcccccaggcagaacc
aaccagcccaaaccaaaccagccaacagcgatcatccaggttgaagatcagaatacaggt
gcaattgaaaacattatagtggaagtaaagaaagagccagatgccgaacctgcagagggg
gaggaagaagaggcacagcctgctgccgcagacgcccctaacggcgacctcacacctgag
atgatcctcagcatgatggaccggtga
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integrated database retrieval system
