Ochotona princeps (American pika): 101523850
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Entry
101523850 CDS
T07609
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04625
C-type lectin receptor signaling pathway
opi04668
TNF signaling pathway
opi04917
Prolactin signaling pathway
opi05133
Pertussis
opi05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
101523850 (IRF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
101523850 (IRF1)
09152 Endocrine system
04917 Prolactin signaling pathway
101523850 (IRF1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101523850 (IRF1)
09171 Infectious disease: bacterial
05133 Pertussis
101523850 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101523850 (IRF1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101523850 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
101523850
NCBI-ProteinID:
XP_004586450
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All DBs
Position
3A:38180576..38185216
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AA seq
322 aa
AA seq
DB search
MPIPRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTRNQK
KERKSKSSRDAKGKAKRKSCGDSSPDTFSDGLSSSTMPDDHSSYTAQGYMGQDSEVEQAL
TPALSPCGFHPWPIPADIMPDSTSELYNLQVSPMPSTSEAATDEDEGGTLTEDIMKMLEQ
SEWQQTSVDGKGYLLNEPGIPATGFYGDFSCKEEPEVDSPGGDIGLSLQRVFTDLKNMDS
SWLDSLSSPVRLPSIQAIPCAP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccctcggatgcgcatgagaccatggctagagatgcagattaattccaaccag
atccccgggctgatctggattaataaagaggagatgatcttccagatcccctggaagcac
gcggccaagcacggctgggacatcaacaaggacgcctgtctgttccggagctgggccatt
cacacaggccgatacaaggcaggagaaaaggagccggatcccaagacgtggaaggccaac
tttcgctgtgccatgaactccctaccggacatagaggaagtgaaggaccagagcaggaac
aagggcagctcggccgtgagggtgtaccggatgctgccacctctcaccaggaaccagaag
aaagagcgaaagtccaagtctagccgagacgccaagggcaaggccaagaggaagtcctgt
ggagattccagcccggacaccttctctgatggactcagcagctccaccatgcctgatgac
cacagcagctacacggctcaaggctacatggggcaggactcggaagtggagcaggccctc
actccagcactgtcgccgtgtggtttccacccctggccaatccctgcggacatcatgcca
gatagcaccagtgaactgtacaacctccaggtctctcccatgccctctacctctgaagct
gcaacagatgaggatgaaggagggacgttaaccgaggacattatgaagatgttggaacag
tcggagtggcagcagacaagcgtggatggcaaggggtacctgcttaatgagcctgggatc
ccagctactggtttctatggagactttagctgtaaggaggagccagaagttgacagccct
ggaggggacattggtctgagcctacaacgtgtattcacggatctgaagaacatggacagc
agttggctggacagcctgtcttccccagtcaggttgccctccatccaggctattccttgt
gcaccatag
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integrated database retrieval system
