Ochotona princeps (American pika): 101523960
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Entry
101523960 CDS
T07609
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03030
DNA replication
opi03410
Base excision repair
opi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101523960 (POLE)
03410 Base excision repair
101523960 (POLE)
03420 Nucleotide excision repair
101523960 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opi03032
]
101523960 (POLE)
03400 DNA repair and recombination proteins [BR:
opi03400
]
101523960 (POLE)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101523960 (POLE)
DNA replication proteins [BR:
opi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
101523960 (POLE)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
101523960 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
101523960
NCBI-ProteinID:
XP_012785308
LinkDB
All DBs
Position
21:complement(4674006..4743044)
Genome browser
AA seq
2171 aa
AA seq
DB search
MELTRDDGPSSSVSAVKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDK
RLISAVDYYFIQDDGSRFKQSVLQGGGVITDEEEASKKIANQLDNIVDMREYDVPYHIRL
SIDLKIHVAHWYNVRFRGNAFPVEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQ
IMMISYMIDGQGYLITNREIVSEDIEDFEFTPKQEYEGPFCVFNEPDEVHLIQRWFEHIQ
ETKPSIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKDNQGEYKAPQCIHMDCLRWVK
RDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMK
YVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTDDGH
VLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDSLLQRVEKTLRHAIEEEEKVPMEQ
VTNFQEVCDQIKTKLSSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCA
ACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPARAFHELSR
EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLH
KVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMA
GIVCFTGANLITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNAKKPKVTISY
PGAMLNIMVKEGFTNHQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKL
KKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADY
WLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDA
GLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDY
YIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKTDVYKQKKISELFTLEGR
RQVMLAQVPDSSPRPDTPDMEDFGLQKLPSSVVPVATKRKRILWESQEESQDPALIVPWQ
EILGQPPALGTTQEEWLVWLGFHKKKWQLQARQRMARRKKRRLEPEQGTSRPVAVRDGPA
TGLGSFLRRTARSVLDLPWQIVQISETSQAGFFRLWAIIGSDLHCIKLNISRVFYVNQRV
AKAEEGPSYRKVNRFLPRSNMVYNLYEYSVPEELYQEHINEINTELSAPDIEGVYETQVP
LLFRAIVQLGCVCVVNKQLARHLSGWETETFALEHLEMRSLAQFSYLEPGSIRHIYLYHH
SQGHKALFGIFIPSQRRASVFVLDTVRSNQMPNLSALYSAEHSLLLEKVGPDLLPPPKHT
FEVRAETDLKTICRAIQRFLLAYKEERRGPTLVAIQSSWELKRLVGEIPILEEFPLVPVH
VADKISYGVLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLF
FARHLQRHNHLLWLSPTARPDLGGKEADDSRLVMEFDDQATVEINNSGCYSTVCVELDMQ
NLAVNTILQSHHVNDMEGTDSVSVSFDAVAQASLEEMVTGIQATSTPASYDETALRPSTF
RILKSMVVGWVKEITQYHNVYADNQVMHFYRWIRSPSSLLHDPALHRTLHNMMKKLFLQL
ISEFKRLGSSVVYANFNRIILCTKKRRIEDAIAYIEYITNSIHSKEIFHSLTISFSRCWE
FLLWMDPSNYGGIKGKVSSRVHCGQVRASDPQEGEAVEDDEEEDSEEDDVEESQSDVEDL
LENNWNILQFLPQAASCQSYFLMIVSAYIVAVYHSMKDELRRTAPGSTPVKKRNSSQLSQ
EAEGAAGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTEPSDMFPVLPGSHL
VLSNPALEFIKCVCKVLSLDTNITNQVNKLNRDLLRLVGVGEFSEEAQFRDPCRSYVLAE
VICRSCNFCRDLDLCKDSAFSQDGAILPQWLCSNCQAAYDSSVIEMALVEALQRKLMAFT
LQDLVCVKCRGVKETHMPVYCSCAGDFSLTIRTQIFMEQIGIFQNIAQHYGMSYLMETLE
WLMQKSPQLGP
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaccagggatgatggcccctcttcctcagtctcagcagttaagcgcctggag
cggagtcagtggacggataagatggacttgcggtttggatttgagaggttgaaagagcct
ggtgagaagacgggctggctcatcaacatgcaccctactgaaatcttagatgaagataaa
cgcttaatcagtgcggtggattactactttattcaagatgatgggagcagatttaagcaa
agtgtgttgcaggggggtggtgtgattactgatgaagaggaagcctctaagaagatagcc
aaccaactggacaacatagtggacatgcgggagtatgacgtcccctatcatatccgcctc
tccattgacctcaaaatacacgtggcccattggtataacgtcagattccgaggaaacgct
tttccagtggaaattgcccgccgagatgaccttgttgaacgacctgaccctgtggttctg
gcatttgacatcgagacgaccaaactacccctcaaatttcctgatgctgagacggaccag
atcatgatgatttcttacatgattgatggccagggctacctcatcaccaacagggagatt
gtttcagaagacattgaagacttcgagtttacccccaagcaagaatacgaggggcccttt
tgtgtcttcaatgaacctgatgaggttcatctgatccagaggtggtttgaacatatccag
gaaaccaaacccagcatcatggtcacctacaatggagacttctttgattggccatttgtg
gaggccagggcagcagtccatggcctgagcatgtatcaggagatcggcttccagaaggac
aaccagggggagtacaaggcgccccagtgcatccacatggattgtctcaggtgggtgaag
agagacagctatcttcctgtgggcagtcataatcttaaggcagctgctaaggccaagctg
ggctatgaccctgtagagctggaccctgaggacatgtgccgaatggccactgagcaaccc
cagactctggctacatattcagtgtcagatgctgttgctacttactacctgtacatgaag
tatgtccaccctttcatatttgccctctgcaccattattcccatggagcccgatgaggtg
ctgcggaagggctctggcacgctgtgcgaggccttgctgatggtgcaggcctaccatgcc
aacatcatcttccccaacaagcaggagcaagagttcaacaagctgacagatgatggccat
gtcctggacgctgagacctacgttggggggcatgtggaggcgctggaatctggggtcttc
cgaagtgacatcccctgccggtttaggatgaatcctgccgcctttgactccctgctgcag
cgagttgagaagaccttgcgtcatgccattgaagaagaggagaaggtgccaatggagcaa
gtcaccaacttccaggaggtgtgtgatcagattaagaccaagcttagctccctgaaagat
gtccctaaccgaatcgagtgtccccttatctaccacctggatgtgggagcaatgtacccc
aacattatcctgacaaaccgcctacagccctcagccatggtggatgaggccacctgtgct
gcatgtgacttcaacaagcctggagccaactgccagaggaagatggcttggcagtggagg
ggcgagtttatgcctgccagtcgcagtgaatatcatcggattcagcaccagttggagtca
gaaaagtttccccccttgttcccagagggacccgctcgagcctttcacgaactgtcacgt
gaggaacaagctaaatatgagaagaggaggctggcagattactgccggaaagcctacaaa
aagatccacatcactaaggtggaggagcgcctcaccaccatctgccaacgggagaactcc
ttctacgtggacacagtgcgagcctttcgggacaggcgctacgagttcaaagggcttcac
aaggtgtggaaaaagaagctttcagcagctgtggaggtgggtgacgcagctgaggtgaag
cgctgcaagaacatggaggtgctgtatgactccctgcagctggcccacaagtgcatcctc
aactccttctacggctatgttatgcgcaaaggagctcgctggtactccatggagatggct
ggcatcgtctgtttcacaggggccaacctcatcactcaggcccgggagctcattgagcag
atcgggaggcccttggaactggacacagatggaatatggtgtgtcctgccgaatagcttc
ccagaaaattttgtcatcaagacgactaatgcgaagaagcccaaggtgaccatttcctac
cctggagccatgttgaacatcatggtcaaggaaggtttcaccaatcaccagtaccaggag
ctggcagaaccttcctccctcacctatgtcacccgctcagagaacagcatcttttttgag
gttgatgggccctacctcgccatgatccttccagcctccaaggaagaaggcaagaaactg
aagaagaggtatgctgtgttcaatgaagatggatctctggctgagctaaagggctttgag
gtgaaacgccgtggggagctgcagctgattaaaatcttccagtcctcggtatttgaggcc
ttcctcaagggtagcacgctggaggaggtatacggttctgttgccaaggtggccgactac
tggctggatgtgctgtacagtaaggctgccaacatgccagattctgagctgttcgagctc
atctccgagaaccggtccatgtcacggaagctggaagactacggggagcagaagtccacg
tccatcagcactgccaagcgcctggccgagttcctgggagaccagatggtcaaggacgcg
ggcctcagctgccgctatatcatctcccgaaagcccgagggctctcctgtcactgagagg
gccatcccacttgccattttccaagcagagcctacagtaaggaagcactttctccggaaa
tggcttaagagctcgtctcttcaggactttgatattcggacaatccttgactgggactac
tacatcgaacggctgggcagtgccatccagaagatcatcaccatccccgccgctctgcag
caggtgaagaatcctgtgccacgtgtgaaacaccctgactggctgcacaaaaagctgctg
gagaagactgatgtctacaagcagaagaagatcagcgagctcttcactctggagggcagg
agacaggttatgttggcacaggtccctgacagcagtccaaggccagacactcctgacatg
gaggactttggcctccaaaaattgccctcctcagtggtccctgttgcaaccaagaggaag
cgaatcctgtgggaaagccaggaggagtctcaggacccagcattgattgtgccctggcag
gagatcttggggcagccccctgcccttggaaccacccaggaggagtggctggtctggctc
ggcttccacaagaagaagtggcaactgcaggcccggcagcgcatggctcgcagaaagaag
cggcgtttagagccagagcagggtacttcgaggcctgtggccgttcgagacgggcctgcc
acggggctggggagcttcttgcgaagaactgcccgcagtgtgctggaccttccgtggcag
attgtgcagatcagtgagaccagccaggctggcttcttcaggctgtgggccatcattggc
agtgacttgcactgcatcaagctgaatatttcccgtgtgttctatgtgaaccagcgagtg
gccaaagcagaggaggggccttcgtatcgaaaggtgaatcgattccttcctcgttccaac
atggtctacaatctctatgagtactcagtgccagaggagctgtaccaagaacacatcaac
gaaatcaataccgagctgtcagcaccagatattgagggtgtctacgagactcaggttcct
ttgttgttccgagccattgtgcagctgggctgtgtgtgtgtcgtcaacaagcagctggca
aggcacctgtcaggctgggaaaccgaaacctttgctctggagcacctggaaatgcgttct
ctagctcaattcagctacctggagccagggagcatccgccacatctacctctaccaccac
tcacagggccacaaagcactctttgggatcttcatcccctcacagcgcagagcgtctgta
tttgtgctggacacggtgcgcagcaaccaaatgcccaatctcagtgcgctctactcagcg
gagcacagcctcctgctggagaaggtgggccccgatctcctgccacccccaaaacacacc
tttgaagtgcgcgcagagacagacctgaagaccatctgcagagccatacagcgttttctg
ctcgcctacaaggaagagcgtcgagggcctaccctagtggccatccagtccagctgggaa
ctgaagcggctagtaggtgagattcctatcttggaggaattcccactggtacctgtgcat
gtggctgacaagatcagctatggagtcctggactggcagcggcatggagcccgacgaatg
atccgacactacctcaacctcgacacgtgcttgtcccaggcctttgagatgagcaggtac
tttcacattcccattgggaatctgccagaggacatctccacctttggctctgacctcttc
ttcgcacgccacctccagcgccacaaccacctgctctggttgtctcctacagcccgccct
gacttaggcgggaaggaggctgacgacagccgcctcgtcatggagttcgatgatcaagcc
acagtggagatcaacaattcaggctgctactccacggtgtgtgtagagctggacatgcag
aacctggccgtcaacaccatccttcagtctcaccacgtcaacgacatggaggggactgac
agtgtgagcgtcagcttcgatgcagtcgcccaggcctcccttgaggaaatggtcacaggc
attcaagccaccagcaccccagccagctatgatgagactgctctccgccccagcacattc
aggattctgaagagcatggtggtgggctgggtcaaggagatcacgcagtaccacaatgtg
tacgcggacaaccaggtaatgcacttttaccgctggatccggtcaccgtcatccctgctc
catgaccctgctcttcaccggactctgcacaacatgatgaagaagcttttcctgcagctc
atctctgagttcaagcgcctggggtcttcagttgtctatgccaacttcaaccgcatcatc
ctctgtacaaaaaagcgccggattgaagatgctattgcctacatagagtacatcaccaac
agtatccactccaaagaaatcttccattccctgacaatttccttctcacggtgctgggaa
tttcttctctggatggatccgtccaactatggtggaatcaagggcaaagtgtcctcccgt
gttcactgtggacaggtgagagctagtgatcctcaggaaggagaggcagtggaggatgac
gaggaggaagattcagaggaggacgatgtggaggagtcccagtccgatgtggaggactta
ctagaaaacaactggaatatcctgcagttcttgccccaggcagcctcctgccaaagctac
ttcctcatgattgtttcagcatacattgtggctgtgtaccacagcatgaaggacgagctg
aggcgcactgccccagggagcacccctgtgaagaagagaaactccagccagctctcccag
gaagctgaaggggcagctggagcccttcctggaatgatcaccttctctcaggattatgtg
gcaaatgagctgactcagagctttttcaccataacccagaaaatccagaagaaagtcaca
ggatctcggaactcgacagagccttcagacatgttccctgtgctccctggttctcatttg
gtgctcagcaatcctgctctggagttcatcaaatgcgtatgcaaggtcctgtccctggac
accaacatcactaaccaggtgaataagctgaaccgagacctactgcgcctggtaggtgtc
ggcgagttctccgaggaggcccagttcagagacccctgccgctcctatgtgctcgcggag
gtcatctgccgcagctgtaatttctgccgggacttggacttgtgcaaagactctgccttc
tctcaggatggggccatcttgcctcagtggctctgctccaactgtcaggccgcctatgac
tcatctgtcatcgagatggccctggtggaggccctgcagaggaagctgatggccttcacc
ctgcaggacctggtctgtgtgaagtgccgtggagtgaaggagacccacatgcccgtgtac
tgcagctgcgctggagacttctccctcaccatccgcactcagatcttcatggagcagatt
ggaatcttccagaacattgcccagcactatggcatgtcgtatctcatggaaaccttggag
tggctgatgcagaaaagccctcagctaggcccctag
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integrated database retrieval system
