Ochotona princeps (American pika): 101524016
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Entry
101524016 CDS
T07609
Symbol
TARS2
Name
(RefSeq) threonine--tRNA ligase, mitochondrial isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101524016 (TARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opi01007
]
101524016 (TARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101524016 (TARS2)
Enzymes [BR:
opi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
101524016 (TARS2)
Amino acid related enzymes [BR:
opi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101524016 (TARS2)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101524016 (TARS2)
Prokaryotic type
101524016 (TARS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
101524016
NCBI-ProteinID:
XP_004588914
LinkDB
All DBs
Position
13:110146478..110161513
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AA seq
722 aa
AA seq
DB search
MGQCRKWRRLLRLPGFRACRLHTVREPPAPTPPSWLIERLGLFEELWAAQVKKLAVMAQK
ESRTIKISLPGGQRVDAVAWSTTPYQLARRISPTLADTAVAAQVNGELYDLERPLEMDSD
LTFLTFDSPEGKAVFWHSSAHVLGAAAEQFLGAVLCRGPSTEHGFYHDFFLGRERTVQGS
ELPGLERVCQKLAATAQPFRRLEASRHQLRQLFKDNPFKLQLIEEKVAGPTATVYGCGTL
VDLCRGPHLRHTGQISALRLLANSSSMWRSSRNPEMLQRVSGISFPTAELLRAWEAWREQ
AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVALIRAEYTHRGFSEVKTPML
FSTKLWEKSGHWEHYKEDMFALQPSDSDGSACSQSEHPARLPTDTLALKPMNCPAHCLMF
AHRPRSWRELPLRLADFGALHRAEASGAVGGLTRLRCFQQDDAHIFCTLDQLEAEIRGCL
DFLRSVYSILGFSFRLALSTRPSGFLGEPHLWDQAEQLLQQALEEFGEPWELNPGDGAFY
GPKIDVHLQDALRRPHQCGTIQLDFQLPLRFDLQYKGQAGTLERPVLIHRAVLGSVERLL
GVLAESCGGKWPLWLSPCQVVVIPVGPEQEGYAREVQQTLQAAGLASDLDADPSLTLSRR
VRRAQLAHYNFQFVVGRKEQSSRTVSVRTRDNQQLGERDLRDATRRLLELQGARVPNAEE
VF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtgtcggaagtggcggcggctgctgcggctcccggggttccgagcctgcagg
ctacacacagtgcgtgagccccctgcgcccacccctccgtcctggctcatagagaggctc
ggcctgtttgaggagctatgggctgcccaggtgaagaagctagcagtcatggcgcagaag
gaatcccggacaataaaaatatcccttcccggagggcagagagtggatgctgtggcctgg
agcacgaccccttaccagctggcccggcggatcagtcccacactggcagacaccgcagtg
gccgcccaagtgaatggagaactttatgatctggagaggcccttggagatggattctgac
ctcacattcctaactttcgattccccagaggggaaagccgtgttctggcactccagcgcc
cacgtcctaggagcagctgcagaacagttcctaggtgctgttctgtgccgaggcccaagt
accgaacatggcttttaccatgatttcttcctggggagggagcggacagttcagggctcc
gagctgcctggtctggagcgggtctgccagaagctggcggccactgctcagccctttcgc
aggctggaggcttcccggcatcagcttcgtcagctcttcaaggataaccccttcaagctg
cagctgattgaggagaaagtagcaggtccaacagcaacagtgtatgggtgcggcacgttg
gtggatctctgccggggcccccacctccggcacaccgggcagatctcagcgctcaggctg
ctcgcgaattcgtcctccatgtggaggtcttccaggaacccagagatgctgcagcgggtc
tcgggaatctccttccccacagcagagctgctgagggcctgggaagcatggagggagcaa
gctgagctgcgggaccaccggcgcatcgggaaggaacaggagctcttcttcttccatgaa
ctcagccctgggagctgcttcttcctgccacgagggacaagggtgtataatgcactggtg
gctttgatcagggctgagtacacacaccgtggattctcggaggtgaaaacacccatgctg
ttttctactaagctctgggaaaagtcagggcactgggagcattacaaggaagacatgttt
gccttgcaaccatcagattcagatgggtccgcatgctcccagagcgagcaccctgccagg
cttcccacagacacccttgccctcaagcccatgaactgccctgcgcactgcctaatgttc
gcccaccggcccagatcctggagggagttgcccctgcgcctggcggactttggggccctg
caccgggccgaggcctctggtgctgtggggggactgacccggctacggtgcttccagcag
gatgacgctcacatcttctgtacgctggaccagctggaagcagagattcgcggctgtcta
gatttcctccgttctgtctattccatcctgggcttctccttccgcctggcactatccact
cgaccgtctggcttcctgggggagcctcatctttgggaccaggctgagcagctccttcag
caggccctagaggagtttggggaaccctgggagctcaaccctggagacggtgccttctat
gggcccaagatcgatgtacacctccaagatgccctgcgtcgacctcatcagtgtgggaca
atccagcttgacttccaactgcccctgagatttgacctccaatataaggggcaggcaggc
accctggagcgtccggtcctcattcaccgagcagtgctcggttctgtggaaaggttgctg
ggagtgctggcagaaagctgtggggggaaatggcccctgtggctgtccccatgccaggtg
gtagtcatccccgtggggcctgagcaggagggatatgccagggaggtacaacagaccctg
caggctgcaggactggccagtgacctagacgcggaccccagccttaccctgagccggaga
gtccggcgggcccagctggcccactacaatttccagtttgtggttggccggaaagagcag
agcagcaggacagtgagcgtccggacacgagataaccagcagcttggtgagcgagatctg
agggacgccacacggcggctgctagagctgcagggcgccagggtccccaacgctgaggag
gtcttctga
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