Ochotona princeps (American pika): 101524063
Help
Entry
101524063 CDS
T07609
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04820
Cytoskeleton in muscle cells
opi05169
Epstein-Barr virus infection
opi05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101524063 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101524063 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101524063 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101524063 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101524063 (VIM)
04147 Exosome [BR:
opi04147
]
101524063 (VIM)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
101524063 (VIM)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
101524063 (VIM)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101524063 (VIM)
Exosomal proteins of other cancer cells
101524063 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
KIF21A_4th
DUF1664
TolA_bind_tri
DUF7491
Sec10_N
GeBP-like_DBD
RBD-FIP
TPR_MLP1_2
DUF4515
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
101524063
NCBI-ProteinID:
XP_004578639
LinkDB
All DBs
Position
16:36305828..36313355
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGQSTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLFSSGSGSA
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFRNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLGE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggtggccagagcacc
gccagccggccgagctccagccggagctacgtgaccacgtccacccgtacctacagcctg
ggcagcgcgctgcgccccagtaccagccgcagcctcttctcgtccgggtccgggtccgct
tacgccacgcgctcctcggctgtgcgcctgaggagcagtgtgcccggcgtaaggctgctg
caggattcggtggacttctcgctggccgatgccatcaacaccgagttcagaaacacccgc
accaacgagaaggtagagctgcaggagctgaatgaccgctttgccaactacatcgacaag
gtgcgcttcctggagcaacagaacaagattctgttggccgagctcgagcagcttaagggc
cagggcaagtctcgcctgggggacctctacgaagaagagatgcgggagctgcgcaggcag
gtggaccagctcaccaacgacaaagcccgtgtcgaggtggaacgcgacaacctgggcgag
gacatcatgcggctccgggagaagttgcaggaggagatgctgcagagggaggaagccgag
agcaccctgcagtctttcagacaggacgttgacaacgcctctctggcacgtcttgacctg
gaacggaaagtggaatccttgcaggaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggcccagatccaggaacagcacgtccagatcgacgtggatgtt
tccaagcctgacctcacagctgccctgcgtgacgttcgtcagcagtacgaaagcgtggct
gccaagaacctccaggaggccgaggagtggtacaagtccaagtttgctgacctctccgag
gctgctaaccgcaacaacgatgccctgcgccaggcgaagcaggagtcaaatgagtaccgc
agacaggtgcagtccctcacctgtgaagtggatgcccttaaaggaactaatgagtccctg
gagcgccagatgcgtgaaatggaagagaactttgccgttgaagctgctaactaccaagac
actattgggcgcctgcaggatgagattcagaacatgaaggaggagatggctcgtcacctt
cgtgaataccaagacctgctcaatgtcaagatggccctggacattgagatcgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttctcatcc
ctgaacctgagggaaactaatctggaatcactccctctggttgacacccactcaaaaagg
acacttctgattaagacggttgagactagagatggacaggttatcaacgaaacttcccag
catcatgatgaccttgagtga
DBGET
integrated database retrieval system
