Ochotona princeps (American pika): 101524175
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Entry
101524175 CDS
T07609
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101524175 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101524175 (UIMC1)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101524175 (UIMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
zf-WRNIP1_ubi
UIM
Motif
Other DBs
NCBI-GeneID:
101524175
NCBI-ProteinID:
XP_004587445
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All DBs
Position
3A:1960516..2033998
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AA seq
719 aa
AA seq
DB search
MPRRKKKVKETPESQNLEKDEDTTNSVTMKRKRKLEDAFIVISDSDGEEPREENGLQKTK
TKQSNRAKRLATRKIAQMTEEEQFALALKMSEQEAREANNQEEEEEQLLRKAIAESLNSC
RPSDSSATRLQPLATGSSSQSHQEKTTDSGLKEGVWQLVPSSLFKGSHKSQGNEAEEREE
PWDHTENTEEEPVSDSSGSWDQSSQPVFENENVNCFDKCTGHLASHTQYGKPQESTGRGC
AFLKASQGRGVTSRNCLPSPDAKGLQDIGGSVHYFWGIPFCPAGVDPNQYTKVILCQLEV
YQKSLKMAQRQLLKKKEFGEPVLPRPPSLIQNECGQGDQTSEKAEGISQDIGDEEKEERE
ESRASVWHPKTKDFQESQVKSLKEKLLLEEEPTTSLGQSSQGLFVEETSEEGNSVPASQS
IAALPSKRSSVLMPPSSAEEITICPETQPSSPEILDLEREISPDNKENPDEIRITEKVGK
REDTKKEVPAFAMPSSSQVSCPLCDQGFPPAKIERHAMFCNGLVVRDTVLTRRQKEAKSK
PGSGRTTQTYRNVDKNEKCYLCKSLVPLSEYQSHVDSCLQRARGNQGDGPGRSSAVYSPE
EGKRQPRLKNPKKKGRLLSLLEQSENKEQPEPKTADAEIKTRSSESGAFRVSSAALEEAS
CSRVTQSSSTNLDLNESPIKSFVSVSEATDCLVDFKKQLTVRTVSQTQTKAGRGRRRKS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaagaaagaaaaaagttaaagaaactcctgaatcacaaaacctggagaaagat
gaagacactacaaattctgtcactatgaagaggaagcgaaaacttgaggatgcattcatt
gtcatatctgatagtgacggagaggaaccaagggaggagaatggattgcagaaaacaaag
acaaaacagtctaacagagcaaagcgtctggctacaagaaaaattgcacagatgacagaa
gaagaacagtttgctctggctctcaaaatgagtgaacaggaagctagggaggcgaacaac
caggaggaagaagaagagcagcttttgagaaaagccattgctgaaagtttgaatagttgc
cggccttctgattcttctgctaccagacttcaacctctggccactggatcatcctcacag
tcccaccaagagaaaaccacagactctgggctcaaagaaggcgtatggcagctggtacct
tcatcactgtttaaaggctcccataaaagtcagggaaacgaggctgaggaaagagaggag
ccctgggaccacactgaaaacactgaagaggagccggtctctgacagctcaggaagttgg
gaccagtcaagccagccagtgtttgagaatgagaacgttaactgttttgacaaatgtact
ggccacttggcatcccacacacagtatgggaagccacaggaaagtactgggaggggttgt
gcttttctcaaggcttcccagggcaggggggttacatctaggaactgtctaccttctcca
gatgccaaaggtcttcaagacattgggggcagtgtgcattacttctggggtattccattc
tgccctgctggagtagacccaaatcaatataccaaggtcattctctgccaattggaagtt
tatcaaaagagcctgaaaatggctcagagacagctcttaaaaaagaaagagtttggggaa
ccagtgttacctagacctccttctctgatccagaatgaatgtggccaaggagatcagact
agtgaaaaagctgaaggcatctcacaagatatcggagatgaagagaaagaggaaagggag
gagtctagggcatctgtctggcaccccaaaaccaaggattttcaagaaagccaagttaaa
agcttgaaagagaaacttttattggaggaagaaccaacaaccagtcttggtcagtcttcc
caggggttatttgttgaagaaacttctgaagaaggaaactctgtgcctgcttcacagagc
attgctgctttgcccagtaagagaagctcagttcttatgcctccaagttctgcagaagaa
atcactatttgtcctgagacacagccaagttcccctgaaattcttgaccttgaaagagaa
atctctccagataacaaagaaaacccggatgaaatcagaataacagagaaggttggtaaa
agggaagataccaagaaggaagtacctgcttttgccatgccatccagtagccaggtctcc
tgtccgctgtgtgaccaaggcttccctcctgcaaagattgagcgacatgccatgttctgc
aatggtctggtggtgcgtgacacagtgttgactcggagacaaaaagaggccaagagcaag
cctggcagtgggagaactactcagacttaccgtaatgttgacaagaatgagaagtgttat
ctgtgtaaatccttggtgccgttaagcgagtatcagagccatgtggactcctgcctgcag
cgtgcaagggggaaccaaggagacgggcctggaaggagcagtgcagtgtactcacccgag
gagggcaagcggcagccacggctgaaaaacccaaagaaaaaaggccgactcctcagtctc
ttggaacagtcagaaaacaaggaacagcccgagcccaagactgcagatgcagagataaag
accaggtcttcagaatcaggagccttcagggtatcctcggcagcactggaagaggcaagc
tgcagcagagtgacccagagttcctctacaaatcttgatttgaatgagtctcccatcaag
tcttttgtttctgtttcagaagccacagattgcttagtagactttaaaaagcaacttact
gtccgcacagttagccagacacagaccaaagcaggcagaggaaggaggagaaaatcctga
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