Ochotona princeps (American pika): 101524206
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Entry
101524206 CDS
T07609
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04151
PI3K-Akt signaling pathway
opi04510
Focal adhesion
opi04512
ECM-receptor interaction
opi04810
Regulation of actin cytoskeleton
opi04820
Cytoskeleton in muscle cells
opi04933
AGE-RAGE signaling pathway in diabetic complications
opi05100
Bacterial invasion of epithelial cells
opi05135
Yersinia infection
opi05146
Amoebiasis
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05205
Proteoglycans in cancer
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101524206 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101524206 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101524206 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101524206 (FN1)
04810 Regulation of actin cytoskeleton
101524206 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101524206 (FN1)
05205 Proteoglycans in cancer
101524206 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
101524206 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101524206 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
101524206 (FN1)
05100 Bacterial invasion of epithelial cells
101524206 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101524206 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101524206 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101524206 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101524206 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
opi00536
]
101524206 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101524206 (FN1)
Membrane trafficking [BR:
opi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
101524206 (FN1)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
101524206 (FN1)
Glycosaminoglycan binding proteins [BR:
opi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101524206 (FN1)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
101524206 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
Interfer-bind
NDNF
FN3_Tor_3rd
fn3_2
Motif
Other DBs
NCBI-GeneID:
101524206
NCBI-ProteinID:
XP_004576905
LinkDB
All DBs
Position
7:complement(96937114..97003866)
Genome browser
AA seq
2475 aa
AA seq
DB search
MLRGPGHGLLLLLSLLCLGTAVPSTGASKSKRQAQQIVQPQSPVAVSQSKPGCYDNGKHY
QINQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTS
YRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHTSQSTSAGSGPFTDMRASVYQPQPPQ
QPAAYGHCITDSDVVYSEGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYNGRTFYSCTSEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALC
HFPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCYGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKFVHGVRYQCYCYGRGIGEWHCQ
PLQTYPGTSGPVQVIITETPSQPNSHPIQWNAPEPSHISKYILRWRPKNSVGRWKEATIP
GHLNSYTIKGLRPGVIYEGQLISIQQYGHREVTRFDFTTTSTSTPMTSNTVTGETAPLSP
VVATSESVTEITASSFVVSWVSASDMVSGFLVEYELSEEGDEPQYLDLPSTATSVNIPDL
LPGRKYIVNVYQISEDGKQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWNRPQAPITG
YRIVYSPSVEGSSTELNLPESANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTG
IPRADEVSPPRDLQFVEVTDVKVTIMWTPPDSPVTGYRVDVLPVSLPGEHGQRLPVSRNT
FAEITGLSPGVTYYFKVFAVNQGRESRPLTAQQTTKLDAPSNLQFVNETDSSVVIIWTPP
RAHITGYLLTVGPTRGGQPTQQTLRPSVTKYPVQDLQPGSEYTVTLIAFKDNFQSPKVTG
VFTTLQPHSSIPAYNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIVV
SGLTPGIEYIYSLQVLRNGKEKDAPIVNRVVTPLSPPTNLHLESNPETGVLTVSWERSTA
PDISGYRITTTPINGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPIS
DTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEEFVDSSV
GYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPSPTDLRFTNIGSDTMRVTWAP
PPSIELTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPLTEYLVSVSSVYEQHESAP
LRGRQKTGLAAPTGIDFSDITTNSFVVHWIPPRAHVTGYWIRHHPEHHSGRPREDRVPPN
RNSITLMNLSPGTEYVVSVVALNGREQSPPLIGQQSTVSDVPKDLEVIASTPTSLLISWE
PPPVTVRYYRIMYRETGKNGPVQEIRVPGTKSTATISGLKPGVEYTITLYAVTGRGDSPA
SSEPISINYRTEIDKPSQMQVTDVQDNSISIRWLPSRSPVTGYKVTTVPKNGSGPSKTKT
VGPDQTEMTIEGLQPTVEYVVSVYAQSQNGESKPLVQTAVTNIDRPKRLAFTDVDVDSIK
IAWESPQGQVSRYRVTYSNPEDGIHELIPAPGGEEDTAELQGLRPGSEYTVSVVALHGDM
ESQPLIGVQSTAIPAPTDLKFIQVTPTSLTAQWTPPRVQLTGYRVQVTPKEKTGPMKEIN
LAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETT
ITITWRTKTETITGFQVDAIPTNGLTPVQRTIKPDVRSYTITGLQPGTDYKIHLYTLNDN
ARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPRAKITGYIIKYEKPGFPPREVVP
RPRPGMTEATITGLEPGTEYTIYIIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPE
ILDVPSTVQKTPFITNPDTGNGIQLPGTSGQQPSVGQQMIFEEHGFRRTTPPTAATPVNL
RPRPYPPNVDEDFQISHVPRGDVDHHLYPHVLGLNPNASTGQEALSQTTISWTPFQESSE
YIISCQPVGIDEQPLQFRVPGTSTSATLTGLTRGVTYNIIVEALKDQRRHKVREEVVTVG
NSVNGGLNQPTDDSCFDPYTVSHYAVGEEWERLSESGFKLSCQCLGFGSGHFKCDSSKWC
HDNGVNYKVGEKWDRQGDNGQMMSCTCLGNGKGEFKCDPHETTCYDDGKMYHVGEQWQKE
YLGAICSCTCFGGQRGWRCDNCRRPGSELSPEGSTSHSYNQYSQRYHQRTNTNVNCPIEC
FMPLDVQADREDSRE
NT seq
7428 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggggtccgggacatgggctcctgctgctgctgtccctcctgtgcctggggacg
gcggtgccctccaccggcgcctcgaagagcaagaggcaggctcagcaaatagtgcaaccc
cagtccccggtggctgtcagtcagagcaagccgggttgctacgacaatgggaagcactac
cagataaaccagcagtgggaacgcacctacctgggcaatgccttggtttgcacctgttat
ggaggaagccgaggtttcaactgcgaaagtaaacctgagcctgaagaaacttgctttgac
aagtacaccggaaacacttacagagttggggacacttatgagcgccctaaagactccatg
atctgggactgtacctgcattggggctgggagaggaagaataagctgcaccattgcaaat
cgctgccatgaaggaggtcagtcctacaagatcggtgatacctggaggaggccgcatgag
actggtggttacatgttggagtgtgtgtgtctgggtaatggaaaaggagaatggacctgc
aagcccatagctgagaaatgttttgatcatgctgctggaacttcctatgtagttggggaa
acctgggaaaaaccttaccaaggctggatgatggtggactgcacttgtctgggagaaggc
agtggacgtatcacttgtacctccagaaacagatgcaatgatcaggacacgaggacttcc
tacaggattggggacacttggagcaagaaggacaaccgaggaaacctgctccaatgcgtg
tgcacaggcaacggcagaggggagtggaagtgtgagaggcacacatctcagagcacctcg
gccggatctggtcccttcacagatatgcgagcatccgtttaccagccccagcctccacag
cagccagctgcatatggccactgtatcacagacagtgatgtggtctattccgaggggatg
cagtggttaaagacgcaaggaaataaacagatgctctgcacatgtctgggcaatggggtc
agctgccaagagacagctgtaacccagacgtacggaggcaattcgaacggggagccgtgt
gtcctacccttcacctacaacggcaggactttctactcctgcacgtcggaagggcgccag
gatgggcatctgtggtgcagcacaacttccaactatgagcaagaccagaagtattctttt
tgcacagatcacacagttttggttcaaactcgaggtgggaattccaatggtgccttatgc
cacttccccttcctatacaacaaccgcaactacactgactgtacttctgagggcaggaga
gacaacatgaaatggtgtggaaccacacagaactatgatgccgaccagaagtttggattc
tgtcccatggctgcccatgaggaaatctgtacaaccaacgaaggggtcatgtatcgcatt
ggagatcagtgggacaagcagcatgacatgggccacatgatgaggtgcacctgtgttggg
aatggtcgtggagaatggacatgcgtggcctactctcaactccgagatcaatgcattgtt
gatgacatcacttacaatgtgaatgacacgttccacaagcgtcacgaagagggacacatg
ctgaattgcacctgttatggtcagggccgaggcaggtggaagtgtgatcccgtggaccaa
tgccaggattcagaaactcgaacattttatcaaattggagactcatgggagaagttcgtg
catggtgtcagataccagtgctactgctatggccgtggcattggggagtggcactgtcaa
cctttgcagacatatccaggcacaagtggtccagtccaagtaattatcactgagacgccc
agtcagcccaactcacaccctattcagtggaatgcaccagaaccatctcacatctccaag
tacatcctcaggtggagacccaaaaattcagtaggccgttggaaggaagccaccatccca
ggccacttaaactcctacaccatcaaaggcctgagaccaggagtgatctacgaagggcag
ctcatcagcatccagcagtatggccacagagaggtgacgcgcttcgacttcaccaccacc
agcaccagcacccccatgaccagcaacacagtcacaggagagacagcaccgttgtctcct
gttgtggccacctctgagtccgtgactgaaatcacagccagcagcttcgtggtctcgtgg
gtgtcagcctctgacatggtgtccggattcctggtggagtatgagctgagcgaggaggga
gatgagccccagtaccttgatcttccaagcacagccacttctgtgaacatccctgacttg
cttcctggccgaaagtacattgtcaatgtttatcagatctctgaagacggaaagcagagc
ttgatcctgtccacttcacagacaacagctcctgatgcgccccctgatcctactgtggac
caagttgatgacacctcgattgttgttcgctggaatagaccccaggcacccatcacagga
tacagaatagtctattcaccctctgtagaaggtagtagcacagaactcaaccttccagaa
agtgccaactccgtcactctcagtgacttgcaacctggtgttcagtataacatcaccatc
tacgctgtggaggaaaaccaagaaagtactcctgttttcatccagcaagagaccaccggc
atcccacgtgcagatgaagtttcccctcccagagacctgcagtttgtggaagtgacggac
gtgaaggtgaccatcatgtggacaccccccgacagcccggtgaccggctaccgagtggat
gtactccctgtgagcctgccaggggagcacggacagaggctgcctgtcagcaggaacacc
ttcgctgaaatcactggactgtcccccggggtcacctattacttcaaggtctttgccgtg
aaccaaggaagagagagccggcctctgactgcgcaacagacaaccaaactggatgctccc
tctaatctgcaattcgtcaatgaaactgactcgagtgtagtgatcatttggactccacct
cgggctcacataacaggctacctgctgactgtgggcccaacccgaggaggccagcccacg
cagcagactctgaggccctcagtcacaaagtacccagtccaggatctgcagcctggatcc
gagtacactgtgaccctgattgcattcaaagacaactttcagagccccaaggtcactggc
gtcttcaccactctgcagcctcacagctccatccctgcttacaacacagaggtcacggag
accagcattgtgatcacatggacccctgcaccaaggattggcttcaagttgggtgtacga
cccagccagggaggggaagcaccacgagaagtgacttcagaatctgggagcatcgttgtg
tctggcttgacccctggtatagaatatatttactccctccaagtcctgagaaatggaaaa
gaaaaggatgcaccaatcgtcaacagagtggtgacaccattgtctccaccaacgaacttg
cacctggaaagcaacccggaaactggtgtgctcacagtctcctgggagagaagcaccgcg
cccgacatcagtgggtacagaattaccaccacccccattaatggccagcagggatattcc
ttggaagaagtggttcacgctgatcagagttcgtgcacttttgaaaacctgagtcctggt
ctggaatacaatgtcagtgtttacactgtcaaagatgacaaggaaagcgtccctatctct
gacaccatcattccagaggtgccccagctcactgacttaagctttgttgatataactgac
tcaagcatcggcctgaggtggaccccgctaaactcttccaccattattgggtaccgcatc
acagtagttgcagcaggagaagggatacctatttttgaagaatttgtggactcctcggta
ggatactacacagtgacagggctggagccgggcattgactatgacatcagcgttatcact
ctcattaatggcggagagagtgcccctactacactgacacagcaaacggctgtcccttca
cccactgacctgcgattcaccaatattgggtcagacactatgcgtgtcacctgggcccca
cctccatctattgaactgaccaatttcttggtgcgctactcacctgtgaagaacgaggaa
gatgttgcagagttgtccatttctccttcggacaatgcagtggttttaacaaatctcctg
cctttgacagaatatttggtcagtgtctccagtgtctatgaacaacatgaaagtgcacct
ctcaggggaagacagaagacaggtctcgctgctccaactggcattgacttctctgacatc
actaccaactctttcgtcgttcactggattcctcctcgagctcacgttacgggctactgg
attcgccatcatcctgagcaccacagtggaagacctcgggaagatcgtgtgcccccaaat
cggaactccatcaccctgatgaacctcagtccaggcacggagtatgtggtcagcgtcgtg
gctctcaatggcagggagcaaagtcctcctttgattggccaacagtcaacagtttctgat
gttccaaaggacttggaagttattgcctcaactcccaccagcctgttgatcagctgggaa
cctccaccggtcacagtgagatattacaggatcatgtatagagaaacaggaaaaaatggc
cctgtccaggagattagagtgcctgggactaagtctacagctaccatcagtggccttaaa
cctggagtagaatataccatcactttgtatgctgtcactggccgaggggacagcccagcc
agcagcgagccaatttccattaattaccgaacagaaattgacaaaccttcccaaatgcaa
gtgacagatgttcaggataacagcatcagtatcaggtggctgccttctcggtcccctgtt
accggttacaaagtgaccaccgtccccaaaaatggctcaggaccatcaaaaactaagact
gtaggcccagatcaaacagaaatgaccatcgaaggcttgcagcccacagtggagtatgtg
gtcagtgtgtacgctcagagccagaatggagagagcaaacccctagttcagactgcagtc
accaacattgatcgccctaaacgactggcattcactgatgtggatgtcgattccatcaaa
attgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgaaccct
gaggatggaatccatgagctaatccctgcacctggtggtgaagaggacactgcagagctg
caaggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacggtgatatg
gagagccagcccctgattggagtccagtccacagccattcctgcaccaaccgacctgaag
ttcattcaggttacacccacaagcctgactgcccaatggacaccacccagggtccagctc
actggatatcgagtgcaggtgactcccaaggagaagaccggaccaatgaaggaaattaac
cttgcccctgatagctcgtctgtcgttgtatcgggactcatggtggccaccaaatacgaa
gtgagtgtctatgctcttaaagacactttgacaagtagaccagctcagggggtcgtcacc
actctagagaatgtcagccctccgagaagggcacgtgtgaccgatgctactgagaccacc
atcaccatcacctggcgaaccaagacagagaccatcactggcttccaggtcgatgccatc
ccaaccaatggcctgactccagttcagagaaccatcaagccagatgtcagaagctacacc
atcacaggtttgcagccaggcactgactacaagatccacctgtacaccctgaacgacaat
gcgcgaagctctcctgtggtcattgatgcctccactgccattgatgcaccatccaacctc
cgtttcctggctaccacccccaactctttgctggtgtcatggcagccaccacgtgccaag
attactggctacatcatcaagtacgagaagcccgggttccctcccagagaagtggtccct
cgaccccggcctggcatgacagaggccaccatcacaggtctggaaccgggaaccgagtac
accatctacatcattgccctgaagaacaaccagaagagtgaacccctgatcgggaggaaa
aagactgatgagcttccccaactggtaacccttccacaccccaatcttcacggaccagag
atcttggatgttccctccacagtacaaaagacccctttcatcaccaatcctgacactgga
aacggtattcagcttcccggcacttccggtcagcagcccagtgttgggcaacaaatgatc
tttgaggaacatggttttaggcggaccacaccacccacagcggccacccctgtaaacctt
agaccaagaccctacccaccgaatgtagatgaggacttccaaattagtcacgtccccagg
ggagacgtggaccaccacctctatcctcacgttctgggactcaacccaaatgcctctaca
ggacaagaagctctctctcagacaaccatctcttggaccccattccaggagagttctgag
tacatcatttcatgtcaacctgttggcattgatgaacaacccttgcagttccgagttcct
ggaacttctaccagtgccactctgacaggcctcacccgaggtgtcacctacaacatcata
gtggaggcgctgaaggaccagagaaggcataaggtgcgggaagaggtcgtgaccgtgggc
aactctgtcaatggaggcctgaaccagcccacagatgattcgtgctttgatccctacaca
gtttcccactatgccgttggagaggagtgggagcggttgtctgaatctggctttaagctc
tcatgccagtgcttgggctttggcagtggtcatttcaaatgcgattcatctaagtggtgc
catgacaacggtgtgaactacaaagttggagagaaatgggatcgtcagggagacaacggc
cagatgatgagctgcacatgcctgggcaatggaaaaggagaattcaagtgcgatcctcat
gagacaacgtgctacgatgacgggaagatgtaccatgtaggggaacagtggcagaaggaa
tatcttggtgccatttgctcctgcacatgctttggaggccagaggggctggcgctgtgat
aactgccgccggccgggatctgaactcagtcctgaaggctccaccagccactcgtacaac
cagtattcacagagatatcatcagaggacaaacactaacgtgaactgcccaattgaatgc
ttcatgcctctagatgtgcaggcggacagagaggactccagggagtag
DBGET
integrated database retrieval system
