Ochotona princeps (American pika): 101524373
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Entry
101524373 CDS
T07609
Name
(RefSeq) medium-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
opi04030
]
101524373
G protein-coupled receptors [BR:
opi04030
]
Rhodopsin family
Vision
Opsin
101524373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srt
7TM_GPCR_Srsx
DUF3810
Motif
Other DBs
NCBI-GeneID:
101524373
NCBI-ProteinID:
XP_004598916
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MSQPWDPQRLTGRQPQHSYEDSTQASIFTYTNSNVTRGPFEGPNYHIAPRWVYHLTTAWM
ILVVVASVFTNGLVLVATMRFKKLRHPLNWILVNLAVADLAETLIASTISVANQFFGYFV
LGHPLCVVEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLASAGIAFSWIWS
AVWTAPPIFGWSRYWPYGLKTSCGPDVFSGTSYPGVQSYMMVLMITCCIIPLSVIVLCYL
QVWLAIRTVAKQQKESESTQKAEKEVTRMVVVMVFAYCLCWGPYTFFACFATAHPGYAFH
PLVAAIPSYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVEDSSELSSASKTEASSVSS
VAPA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagccgtgggacccccagaggctcacgggcaggcaaccgcagcacagctacgag
gacagcacacaggcgagcatcttcacctacaccaacagcaatgtcaccagaggcccgttt
gaaggcccgaattatcacatcgcccccaggtgggtgtaccacctcaccaccgcctggatg
atattagtggtggttgcgtctgtcttcaccaatgggctggtgctggtggccaccatgagg
ttcaagaagctacggcatcctctgaactggattctggtgaacttggcggtggctgaccta
gcagagaccctcatcgccagcaccatcagcgtggcgaaccagttctttggctatttcgtg
ctgggccaccctctgtgtgttgtggagggttacaccgtgtccttgtgtgggattacgggg
ctctggtccctagccatcatttcctgggagaggtggttggtggtttgcaaaccctttggc
aatgtgagatttgatgccaagctggccagtgcaggcatcgccttctcctggatctggtcg
gctgtttggacagccccacccatcttcggttggagcaggtactggccatatggcctgaag
acctcatgtggccccgatgtgttcagcggcacctcgtaccctggcgtgcagtcctacatg
atggtcctcatgatcacgtgctgtatcatcccactcagtgtaattgtactctgctacctg
caagtgtggctggccatccggacggtggccaagcagcaaaaagaatcagagtctacgcag
aaggctgagaaggaagtgacacgcatggtagtggtgatggtctttgcctactgcctctgc
tggggcccctacaccttctttgcatgctttgctaccgcccaccctggctatgccttccac
cctctggtggctgccataccatcctactttgccaaaagtgccaccatctacaaccccatt
atctacgtctttatgaaccggcagtttcgaaactgcatcttgcagctctttggaaagaag
gtcgaggacagctctgagctctccagcgcctccaaaactgaggcctcatccgtctcttca
gtggcacccgcatga
DBGET
integrated database retrieval system