Ochotona princeps (American pika): 101524401
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Entry
101524401 CDS
T07609
Symbol
SYNE3
Name
(RefSeq) nesprin-3
KO
K21761
nesprin-3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101524401 (SYNE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101524401 (SYNE3)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
101524401 (SYNE3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
KASH
Spectrin
ADY4_C
ACL4_C
PigL_N
Motif
Other DBs
NCBI-GeneID:
101524401
NCBI-ProteinID:
XP_036352252
LinkDB
All DBs
Position
20:5231572..5269529
Genome browser
AA seq
1072 aa
AA seq
DB search
MAREPEQDFHRSVADAQEWMQAVHERLHANDNTQGPRAALEARLQETEKICQLEPEGRVK
VDLVLGAAEALLASCHETQKPDILARLKDIKAQWEETVTYMTHCHSRIEWVWLHWSEYLL
ARDEFYRWFHKLTVTLEPPVELQLGLQEKRWQLSHAQVLLQNVDHQAVLLERLLEEAASL
FHRIGDPSVDEDAQKRMQAEYDAVRTKAQDRVHLLAQVVQEHEQYQANVDEFQLWLQAVV
EKAHSCLGRNRKLSPTHRLSALQDIARDFPRGEESLQRLEEQSVGIIQNTSPLGAEKVAA
ELEDMRKVLEKLRMLWEEEEQXLQGLLRAEGACEQRAQQLEAELGEFRKRLHGLAQEGLE
PAAMAKAGTEDELVAHWRRCTAMQAALALEEPRVERLQAQLKELLVFPHHLQPLSKSVVA
AIQDYQSLKGKNTRMRNTVGAQLWQRFQRPLQDLQLWKALAQRLLEVTASLPDLPSIHTF
LPQIEAALVESSRLKEQLTMLQLKKDLLGSVFDRDRAAALLEEVASLVRDRDLLHNSLLQ
RKSKLQSLLAQHQDFGAALEPLQRKLLDLKVHLLAEKELQRDLPEKQAQLSRLQGLQEEG
LQLGAQVESLKSLVQENSSHQHRWGQLSSDCQVLQRALEDLVDDRRQSVREHFTFSHELL
ELRQWIAMLTEKLEAHQGDGASQEAEVERLLEDFPEKEAQLLLTEAHGRLVLEKSSQEGA
RGIQEQLRELTESWQALQLLKERVLSFIRDQQLQRTDMDSGKGMVFTNNIPKPGFLIDPA
DPLPRHRRGAHLLMEEGGSREEPSRLLRDFKQWLQLENTKLVQIIAARASTAEDLAAREA
KLQELEAHMPEGQHLFESLLHLAPARETSEELEDVRYRWMLYKSKLRDSSHLLHCHLHHH
CHHHHHVHRHTSTTTIPINTIPLSTTAIICTFITTIITITTAYSSVTTISTNTSISTIPV
ATTVSLPPPSTAPFPSTPSSPLSSLSNYHHLIIINPRCCLPRSLFQTRRRRGLGQLFRKA
CCTALPLQLLLLLLLLLLFLLPVGDEARSCTLANNLARSFTLMLRHHGPPPT
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctagggagcctgaacaggacttccacaggagcgtggcagatgcccaggagtggatg
caggctgtgcatgagcggctgcacgctaacgacaacacccaggggccccgggcggccctg
gaggcccggctgcaggagacggagaaaatctgccagctggagcccgaggggcgtgtgaag
gtggacctggtgctgggggcggcggaggccttgctggcgagctgccatgagacccagaag
cccgatatcctagcccggctgaaggacatcaaggcccagtgggaagagacggtcacctac
atgactcactgccacagccgcatcgagtgggtgtggctgcactggagcgagtacctgctg
gcccgagacgagttctaccgctggttccacaagctgacggttacgctcgagccccccgtg
gagctgcagctgggcctgcaggagaagcggtggcagctgagccatgcccaggtgctgctg
cagaacgtggaccaccaggccgtgctcctggagcggctgctggaggaggcagcctcgctt
ttccacaggatcggagaccccagcgtggacgaagatgcccagaagaggatgcaggccgag
tacgatgcagtgaggaccaaggcccaggaccgggtgcacctgctggctcaggtggtccaa
gagcatgagcagtaccaggcaaatgtggatgagttccagctgtggctgcaggcagtggtg
gagaaggcacacagctgcctggggcggaaccgcaagctgagccccacacaccgactctct
gcgctgcaggacatcgcccgggatttccccaggggagaggagtcgctgcagcggctggag
gagcagtcggtcggtatcatccagaacacgtctcccctgggtgcggagaaggtggccgca
gaactggaagacatgcggaaggttctggagaaactgcggatgctttgggaggaggaggag
cagnngctgcagggcctgctcagggccgagggagcctgcgagcagcgggcccagcagctg
gaggctgagctgggagaattccggaagcgccttcacgggctagcccaggaggggctggaa
cctgcggccatggcgaaggctggcacggaggatgagctggtggcgcactggagacgctgc
acggctatgcaggcggccctggccttggaggagccccgggtggagcggctacaggcccag
ctgaaagagctcctggtcttcccacatcacctgcagcctctctccaaaagtgttgtggcc
gccatccaggattatcagagcctaaaggggaagaacacgaggatgcgcaacactgtgggc
gcacagctgtggcagcgcttccagcggcccctgcaggacctgcagctgtggaaggccctg
gcccagcggctcctggaggtcacggccagcctgccagacctaccctccatccacaccttc
ctgccccagatcgaggcggccctggtggaaagctcccgcctgaaggagcagctgaccatg
ctgcagctcaagaaagacctcctgggcagcgtctttgaccgggacagagcagcggccctc
ctggaggaggtggcgagtttggtgagggacagggacctgctgcataacagcctcctgcag
cggaagagcaagctgcagagcttgctggcccagcaccaggacttcggggccgcactcgaa
cccctgcagaggaagctgctggacttgaaggtccatctccttgctgagaaggagctgcag
cgggaccttcctgagaagcaggcgcagctctcgaggttgcaggggctgcaggaggaagga
ctgcagctgggggcgcaggtggagtctctgaagtcactggtacaggagaattccagccac
cagcatagatggggccagctctcctctgactgccaggtcctgcagcgggctctggaggac
ctcgtggatgaccgtcggcagagtgtgcgggagcacttcaccttcagccacgagctgctg
gagctgcggcagtggatcgctatgctcacggagaagctggaggcgcaccagggagacggc
gcatcccaagaggccgaggtggagaggctgctggaagacttcccggagaaggaggcccag
ctgctgctgaccgaagcacatggccgcttggtgctagagaaatcttctcaggagggggcc
aggggaatccaggagcagctgagggagctgacggagtcctggcaggccctgcagctgctg
aaggagcgcgtactgagcttcatcagggaccaacagctgcagaggacggatatggattca
gggaagggaatggttttcaccaacaacatccccaagcctgggttcctcatcgaccctgcg
gatcctcttcccaggcatcgccggggggcacacctgctcatggaggaagggggcagccgg
gaggagccatcccggctcctgagggacttcaaacagtggctgcagttggaaaacaccaag
ctggttcagatcatcgcagcaagagccagcaccgctgaggacctggcggcccgggaggca
aagctgcaggagctggaggcacacatgccagaaggtcagcatctcttcgagtcccttctt
catcttgcacctgcacgggagacctcggaggaattggaggatgtgcgctaccgatggatg
ctatacaagtccaagctcagggactccagccacctgctgcactgtcaccttcatcaccac
tgccaccaccatcatcatgttcaccgtcacacctccactaccaccatccccatcaacacc
atccccctctctaccactgccatcatctgcaccttcattaccaccatcatcaccatcacc
actgcctactccagcgtgaccaccatcagcaccaacacctccatcagcaccatccctgtc
gccaccactgtctcactacctccaccttcaacagcccccttccccagcacaccatcctca
ccattgtcatccctgtcgaactaccaccacctcattatcatcaaccctcgttgctgcctg
ccaagatctctgttccagactcggcggcggcgaggccttggccaactcttccggaaggca
tgctgcacagcgctcccactgcagctgctgctgctgctgctgctgttgctgctgttcctg
ctgcccgtcggggacgaggcccgcagctgcacgctggccaacaacctcgctcgctccttc
acactcatgctacgccaccatggccccccgcccacctag
DBGET
integrated database retrieval system
