Ochotona princeps (American pika): 101524533
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Entry
101524533 CDS
T07609
Symbol
PDLIM3
Name
(RefSeq) PDZ and LIM domain protein 3 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101524533 (PDLIM3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101524533 (PDLIM3)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101524533 (PDLIM3)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101524533
NCBI-ProteinID:
XP_004579310
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Position
2A:complement(51268499..51298913)
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AA seq
364 aa
AA seq
DB search
MPQNVVLPGPAPWGFRLSGGIDFNQPLIITRITPGSKAAAANLCPGDVILAIDGFGTESM
THADAQDRIKAAAHQLCLKIDRADTRLWSPQVSEDGKAHPFKINLESEPQDVNYFEHKHN
IRPKPFIIPGRSSGCSTPSGIDGGSGRSTPSSVSTISTICPGDLKVAAKMAPNIPLEMEL
PGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTALGEAPSMSESTASVPPHSDVYRMLHDN
QDEPTRPRQSGSFRVLQELVNDGPDDRPAGTRSVRAPVTKVHGAAGGGQKMPFCDKCGNG
IVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTRPPEGYEAVTL
YPKV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaacgtagtcctcccgggccctgcgccctggggcttcagactctcggggggc
atagacttcaaccagcccttgatcatcaccaggatcactccaggaagcaaggcggcagct
gccaacctgtgtcctggtgatgtcatcctggctattgatggcttcgggacagagtccatg
actcatgcggatgcacaggacaggattaaagcagcggcacatcagctgtgtctcaaaatt
gacagagcagacactcgcttatggtccccacaggtctctgaagatggcaaagctcatcct
ttcaaaatcaacttagaatcagaaccacaggatgtgaactactttgaacacaagcacaat
attcggcccaaacctttcataatcccaggccgaagcagtggatgcagcacgccctccggt
attgatggtggcagtggacgtagcaccccctcttctgtcagtactattagtaccatttgc
ccaggtgacttgaaagttgctgctaagatggcccctaacattcctttggaaatggaactt
ccgggtgtgaagattgtccatgctcaatttaatacacctatgcagttgtactcagatgac
aatattatggaaaccctgcaggggcaggtttccacagctctaggggaagctccctccatg
agtgaatccacggcctcggtgccccctcactcggatgtgtaccgaatgctccatgacaat
caggatgaaccaacacggcctcgccagtctggctctttccgagtgctacaggagttagtg
aacgatggccctgatgaccgtcccgctggaacccggagtgtgagagctccggttacgaaa
gtccacggtgctgctggcggcggacagaagatgcctttctgtgacaagtgtggaaatggc
attgtcggtgcagtggtgaaggcgcgggataagtaccggcaccccgagtgcttcgtctgt
gccgactgcaacctcaacctcaaacaaaaaggctacttcttcgtggaaggggagctgtac
tgcgaaactcatgcgagagcgcgcacgaggcctcccgagggctatgaggccgtcactctg
taccccaaagtttaa
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