Ochotona princeps (American pika): 101524556
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Entry
101524556 CDS
T07609
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04270
Vascular smooth muscle contraction
opi04360
Axon guidance
opi04611
Platelet activation
opi04625
C-type lectin receptor signaling pathway
opi04810
Regulation of actin cytoskeleton
opi05135
Yersinia infection
opi05152
Tuberculosis
opi05163
Human cytomegalovirus infection
opi05200
Pathways in cancer
opi05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101524556 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101524556 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
101524556 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101524556 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
101524556 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101524556 (ARHGEF12)
05205 Proteoglycans in cancer
101524556 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
101524556 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
101524556 (ARHGEF12)
05152 Tuberculosis
101524556 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101524556 (ARHGEF12)
Membrane trafficking [BR:
opi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101524556 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
101524556
NCBI-ProteinID:
XP_012782392
LinkDB
All DBs
Position
1:complement(16550931..16700051)
Genome browser
AA seq
1525 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRDSPTDKKQKVERSASHDFDPTGLVQRCVIIQKDD
NGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSY
VALTVQGRPPGSPQIPLADSEVEPSVLGHMSPLMTSPHSPGASGNMERITSPVLMGEENN
VVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQEAKKHIPQLQEQLSKATGS
AQDGALVTPSRPPGDTLTVSEAEVDPGDIPGRADCSSGDTSRPNSDSADSPRSGLRERIS
LEENPEKTEAIQDTDTQALIGSPSTRVTPHIIGAEDDDFGTEHEQINGQCSCFQSIELLK
SRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRRIFLEFHQFFLDRSAHLKVS
VPDEISMDLEKRRPELIPEELHRHYIQTMQERVHPEVQRHLEDFRQKRSMGLTLAESELT
KLDAERDKDRITLEKERACAEQIVAKIEEVLMTAQAVEEEKSSTMQYVILMYMKHLGVKV
KEPRNLEHKRGRIGFLPKIKQSMKKDREGEDKGKRRGFPSILGPPRRPSRHDNSAIGRAM
ELQKLRHPKHLSTPSSVSPEPQDSTKLRQSGLASEAADIGYPPANSVLSVASGAALSQEG
GKENDTGSKQIGETPASGDSLDGPPRTPNAAFDFPPPPLDQVQEEECEVERVIEHGTPKP
FRKFDSLAFGESQSEDEQFENDLETDPPNWQQLVSREVLLGLKPSEIKRQEVINELFYTE
RAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQLHIGLNEQMKAVRKRNETS
VIDQIGEDLLTWFSGPGEERLKHAAATFCSNQPFALEMIKARQKKDSRFQTFVQDAESNP
LCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEKEKVKKAADHCRQILNYVNQAVK
EAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKMIHEGPLVWKVNRDKTIDLY
TLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLNTVLVRQVATDNKAFFV
ISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTKPIPLSESPSCEGDNDEEEP
SKLKVEHHGISVTGLRSPDRDLGLEAPLVSSKPQSHSLSTSGKSEVDVLFGTERQFAKEQ
NSDGTLKEAGVNYHITIPDSHLLVSEERWATDALRNLDLLKQLLVQELGLTEKSTQEDWQ
HFPGQRTASQGVQADSGTRNSETVKDCHAGEGQMPVRTGTGDIATCYSARTSTESSVRRD
SVVLASQESQASSILVMDHMIMTPEMSAAEPEGGLDESGEHFFDAREAHSDDNPSEGDGT
AKKEESDVNLRISGTCLILDGYELMQESSTDEEVASSLGLQPSTGMPSVDSPYPQQDSPQ
NTRSEEVVSPFSPEFLMQQRWGAMEDSCFEIQSPLSCTDSHSQIMEYIHKIEADLEHLKK
VEESYTILCQRLAGSALTDKHSDKS
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtcgactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattctgaaccgagactcacccacagataagaagcagaaagttgaacgcagtgca
tcacatgattttgatccaacaggtcttgttcagcgttgtgtgatcatccagaaagatgac
aatggatttgggttgacagtcagtggagacaatcccgtcttcgtacagtctgtgaaagaa
gatggagcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatgga
actctggtgactcactcaaaccatttggaagtggtgaagctaatcaaatccggttcctat
gtagctctcactgttcagggacgcccacctgggtcgccccagattccgcttgctgattct
gaagtagaaccatcagtccttggacatatgtctcctctcatgacatcccctcattcacct
ggagcatctgggaatatggagagaatcaccagccctgtgctaatgggggaggaaaacaat
gtggttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacgg
ctacagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatc
caagaggccaagaaacacattcctcagctgcaagagcagctatccaaagccacaggctct
gctcaggatggagctctagttacaccctccaggcctccaggtgacaccttaacagtcagt
gaggcagaagtagatcctggagatatcccaggcagggctgattgcagctctggagatact
tctcggccgaacagtgacagtgcagatagtcccaggagtggcctcagagagaggatttct
ctggaagaaaacccagagaaaaccgaagcaattcaggacactgacactcaggcactcatt
gggagtccctcaacccgtgtgacacctcatatcattggagcagaggatgatgattttgga
actgagcacgaacagattaatgggcagtgcagctgtttccagagcattgaactgctaaaa
tctcgccctgctcacttggctgttttcttacaccatgtagtttcacaatttgaccctgca
acattgctctgttatctctattcagacttgtataaacagaccaattccaaggaaactcgc
cgcatcttcctggagtttcatcagttcttcctggatcgatcggcacatctgaaagtttct
gttcctgatgaaatctctatggatctagaaaagagacgacctgaactgattcctgaggag
ctgcatcgccactatatccagactatgcaagaaagagtccacccagaagttcagaggcac
ttagaagattttcggcagaaacgtagcatgggactgaccttggctgaaagtgaattgact
aaacttgatgcagagcgagacaaggaccgcatcactctggagaaggagcgggcgtgtgca
gagcagattgttgccaaaattgaagaagtattgatgactgctcaggctgttgaagaagaa
aagagttccacaatgcagtatgttattctcatgtatatgaaacatttgggagtaaaagtg
aaagaacctcgaaatttggagcataagcggggtcggattggattccttccaaaaatcaag
caaagtatgaagaaagatagagaaggcgaagacaaagggaagcgaagaggatttcccagc
atcttgggacctccaaggcgaccaagtcgtcatgacaacagtgcaattggcagagccatg
gagctgcagaagctgcgccaccctaagcacttatccacaccctcatctgtgagtcctgaa
cctcaagactctacaaagttgcgccagagcgggttagcaagtgaagcagcagacattggc
tatccgcctgccaattccgtgttatctgttgcttcaggggctgctctttcccaggaagga
ggaaaagagaatgatacgggatcaaagcaaattggcgaaaccccagcatctggagactcc
ttggatggcccacctcgcactcccaatgctgcctttgattttccccctcctccgttagac
caagtgcaggaggaggaatgtgaagtagaaagggtgattgaacatggaacaccaaaaccc
tttcgaaagtttgacagcttagcttttggagaaagtcaaagtgaagatgaacaatttgaa
aatgacctagaaacagatccacctaattggcagcagcttgttagtcgagaagtgttactt
ggactgaaaccctctgaaatcaaaagacaagaagtaattaatgaattgttctacacagaa
agagctcatgttcgaacactgaaagttcttgatcaagtgttttatcagcgagtgtccaga
gaaggaattttgtcaccatcagaactacggaagattttttctaacttggaagatattctt
caacttcatattggactgaatgaacaaatgaaggctgttcgaaagaggaatgagacttct
gttattgatcaaattggggaagatttgttgacctggttcagtggaccaggggaagagaga
ctgaaacacgctgctgccaccttctgcagtaaccagccttttgccctggaaatgatcaag
gctcgtcagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatcct
ctatgtcgtcgtcttcagctaaaggatatcattcccactcaaatgcagaggcttacaaaa
tatccacttctgttggataatattgccaagtatacagaatggcccacagagaaggagaag
gtgaagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaagctgtcaag
gaggcagaaaacaagcagcgcttagaagattatcagcgtcgtcttgatacttccaatctg
aagttgtcagagtacccaaatgtggaagagctcaggaatttggacttaacaaaaaggaag
atgattcatgaagggccattggtttggaaagtgaatagagataaaactattgatctgtat
acattgctgctggaagacattcttgtattgttacaaaagcaagatgatagattggtgtta
aggtgtcatagtaagattctggcatctacagctgatagcaaacacacatttagccctgtc
attaagttgaatacagtgctggttcggcaggtggcaacagataacaaagctttttttgtc
atctccatgtcagacaatggagcccaaatttatgaactagtggcacagacggtttcagag
aagactgtctggcaggaccttatctgtaggatggctgcatcagtgaaggagcaatccaca
aagccaatcccattatcggaatctccatcttgcgaaggagacaatgatgaagaagaacct
tcaaaattaaaagtagaacatcatggcatttcagtcactggcctgcggagcccagataga
gatttgggattagaagctcccttagtatcatcaaaacctcagtctcattcactgagcacc
tctggaaaatcagaggtggatgttctctttgggactgagagacagtttgcaaaggagcag
aattctgatggaacactaaaggaagctggagtaaattatcacatcacaatcccagattca
cacttgctcgtctcagaagaacggtgggctacggatgcactaaggaatttggacttactg
aagcagctgctggtccaagagttgggtttgactgagaaaagcactcaggaagattggcaa
catttcccaggacagaggacagcctctcagggggtacaggcagacagtggaaccaggaac
tctgaaactgttaaggactgtcacgctggtgaaggacagatgcctgttagaactggaact
ggtgacattgcaacttgttacagtgcacggacttcaactgaatcttctgttcgacgggat
tcagtggtactggcatcccaagagagccaggcaagtagcattttagtaatggaccacatg
attatgaccccagagatgtctgccgcagagccagaagggggtctggatgagagtggagag
cacttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggcaca
gctaaaaaggaagagagcgatgttaatttacgcatctcaggaacctgtctgatccttgat
ggctatgaactgatgcaggagagctccacagacgaggaggtcgcctcctcactcggcctg
cagcccagcacaggcatgccctctgtggactccccctacccgcagcaggattctccccag
aatactcgttctgaggaggtcgtttcaccattcagcccggaattcctgatgcagcagcgc
tggggagctatggaggattcctgctttgagatccagagtcctctgtcttgtacagattca
cacagccagatcatggaatacattcataaaatagaggctgaccttgaacacttaaagaag
gtggaggaaagttacaccattctttgccaaaggctggctggatcagccctcacagataaa
cactcagataaaagttag
DBGET
integrated database retrieval system
