Ochotona princeps (American pika): 101524621
Help
Entry
101524621 CDS
T07609
Symbol
TRIM45
Name
(RefSeq) tripartite motif-containing protein 45 isoform X1
KO
K12021
tripartite motif-containing protein 45
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101524621 (TRIM45)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101524621 (TRIM45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
Ig_GEX2_N
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Invasin_D3
ANCHR-like_BBOX
DegS
ATP-synt_ab_C
Y_Y_Y
BAR
PML_CC
Motif
Other DBs
NCBI-GeneID:
101524621
NCBI-ProteinID:
XP_004581925
LinkDB
All DBs
Position
13:complement(104654049..104662832)
Genome browser
AA seq
580 aa
AA seq
DB search
MSANGKPLLGFMRKLPSGTAPGNSGKTHCPSCFELFQAPRLLPCLHTVCIKCLEQLEPFS
VVDIRGGDSDTSSEGSMFQELKPRSMQPQIGILCPVCDAQVDLPKGGVKALTIDHLAMND
VMLESLRGEGQGLVCDLCSDREVEKRCQTCKANLCHFCCQAHRRQKKTTYHTMVDLKDLK
GYSRIGKPIPCPTHPTEELSLFCERCDRPVCRDCVVGEHREHPCDFTSNVIHKHGDSVRE
ILKGTQPHVEALEEALVQIKDLSSALQERVEAVAADIRTFSEGYIKAIQEHRDKLLKQLE
DIRVQKENSLHLQKAQLEQLLADMRTGVEFTEHLLTSGSDLEILITKGVVVERLRKLNKI
EYSARPGVNDKIYFSPQEKAGQCRGYEVYGAINTKEVDPTKCVLQGEDLHRAREKQTASF
TVLCKDATGENMGRGGDNIRVAVVPKDKKDSPVRTVVQDNKDGTYFVSYTPKEPGLYTVW
VCVKEQHVQGSPFTVTVRRKHRPHTGVYHCCTFCSSGGQKTARCACGGTMPGGYQGCGHG
HKGHPGRPHWSCCGKFTEKSECTNTSGQSAPRSLLRTVAL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaacgggaagccgctgctgggcttcatgcgcaaactccccagtgggactgca
cccgggaattcaggcaagacgcactgcccttcctgctttgagcttttccaagccccccgg
ctcttgccttgtttgcacacggtttgcatcaagtgtctggagcagctggaacccttctcg
gtagtggacatccgaggaggcgactcagacacgagctctgaagggtccatgttccaggaa
ctcaagccacgcagcatgcagccgcagattggcatcctctgtccggtatgtgatgctcag
gtggacctgcccaagggtggagtgaaggctttgaccatagaccacctggccatgaacgat
gtgatgctggagagcctgcgtggggaaggccagggcctggtgtgtgacctgtgcagcgac
agggaagtggagaagaggtgtcagacctgcaaagccaatctctgccacttctgctgccag
gctcataggcggcagaagaaaaccacttaccacaccatggtggacctcaaagacctgaaa
ggctacagccggattgggaagcctatcccatgtcctactcaccccaccgaggagctcagt
ctgttctgtgagcgctgcgaccgccctgtgtgccgggactgcgtggtgggggagcaccga
gagcatccttgtgacttcaccagcaacgtcatccacaagcatggggactccgtgcgggag
attctcaaaggcactcagccccacgtggaggccctggaggaagcactggttcagataaaa
gatctcagcagtgcgctccaggagcgggtggaggctgtggccgctgacatccgcaccttc
tctgagggctacatcaaggccatccaggagcaccgggataagctgctgaagcagctggaa
gacataagggtccagaaggagaactcgctgcacctgcagaaggcacagctggaacagctg
ctggcagatatgcggactggagtggagttcactgagcacttgctgaccagtggctcggac
ctggagatcctcatcaccaagggtgtggtggtagaacggctcaggaagctcaacaaaatt
gagtacagtgcccgccctggagtgaatgataagatctacttctctcctcaggagaaagca
ggccagtgccgtggctacgaagtttatggggccattaataccaaagaggttgatcccacc
aaatgtgttcttcaaggagaagatctccaccgagcccgagagaaacagacagcttctttc
actgtgctctgtaaggatgccacaggagagaacatgggaagaggcggagacaacattcgt
gttgctgttgtccctaaggataagaaagacagtccagtcagaacagtggtccaggataac
aaggatgggacatactttgtttcctatacccccaaggagcctggtctgtacaccgtgtgg
gtctgtgtcaaagaacagcatgtgcagggctcgccattcactgtgactgtgaggagaaag
caccgcccacacacaggtgtatatcattgttgtaccttctgctccagtggaggacagaag
actgcccgctgtgcctgtggcggcaccatgccaggtgggtaccaaggctgtggccatgga
cacaaaggccacccaggtcgtccccactggtcatgctgtggaaagtttaccgagaagtcc
gaatgcacaaacacgagtgggcagagtgcaccaaggagcttgctcaggaccgtggcactc
tga
DBGET
integrated database retrieval system
