Ochotona princeps (American pika): 101524802
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Entry
101524802 CDS
T07609
Name
(RefSeq) protocadherin beta-2
KO
K16494
protocadherin beta
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101524802
Cell adhesion molecules [BR:
opi04515
]
Cadherins
Protocadherins
101524802
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
InlK_D3
Big_9
ToxB_N
Motif
Other DBs
NCBI-GeneID:
101524802
NCBI-ProteinID:
XP_012782805
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Position
3A:complement(31331372..31333959)
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AA seq
575 aa
AA seq
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MEAWRGKVHALKQRQVLTFFVLLGIAQAASEPGRYSVAEETESGSVVANVLKDLGLEVGE
LAARGARVISKGKKIGLRLDRQTGDLLLSEKLDREALCGPTEPCVLPLQVLLENPLQFFQ
AELRIRDVNDHSPVFLDKEIILKIPEGLSPGTTFLIEGAQDSDVGSNSLQNYTISPNFHF
QLKLQASPDGMMLPPQLVLDKALDREEEPEIRLILTALDGGTPIRSGTALVRIEVLDIND
NAPEFVQMLYEVQVPENSPVGYQVATVFARDLDDGTYGEISYVFSQASEDVRKTFQIKEK
SGELILTQKLDFEFIQTYTVTIQATDGGGLSGSCVVHVQVMDLNDNAPELTISTLIAQIP
ENSEETVVAVFSVSDPDSGDNGRIVCSIQDDVPFFLKPSVENFYTLVANAALDREAKAQY
TITITVSDLGTPRLQSQHNVTVHVSDVNDNAPTFSQALYTLFVLENNSPALHIGSVSASD
RDAGGAVAVGSGCGVSVGEGHLFPAGAGCGGVGPLVDVGGAGTLSHSYQYEVCVSGGTGT
GEFKFTKPVVPNLLGHDPVRINEANPSFRDSFEYN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctggaggggaaaggtacacgccctgaaacaaaggcaagtcttgacattcttt
gttttgctgggcatagctcaggctgcttcggagcctgggcgctattcggtggccgaggaa
acggagagtggctccgttgtggccaatgtgttaaaagacctgggactggaggtaggagaa
ctggctgcgcggggggcccgggtcatttccaaagggaaaaaaataggtttgcggttggac
aggcagaccggggatttgctattaagtgagaagctggaccgggaggcattgtgcggcccc
acggagccctgcgtgctgcctttgcaggtgctactggaaaaccccttgcagttttttcag
gctgagctgcgcattagggacgtaaatgatcactctccggttttcctggacaaggaaatc
attttgaaaatcccagaaggtctgtctcccggaactactttcctaatagaaggcgcccag
gactcagatgtaggaagtaatagtctccaaaactacaccatcagccccaatttccacttc
cagctgaagctacaagcgagtcccgatggcatgatgctgccgccgcagctggtgctggac
aaagccctggatcgcgaggaggagcctgagatcaggttaatcctcacagcactggacggc
gggactccgatcagatctggcaccgccctggtccgcattgaagtcctagacatcaatgac
aatgctcccgagttcgtacagatgctctatgaggtgcaagtgccagagaacagccctgtg
ggctaccaagtggccactgtcttcgctagggatttagatgatggaacctatggagaaata
tcttacgtattttcccaagcttctgaggatgttcgcaaaacatttcaaataaaagaaaag
tccggtgagctcattctaacacagaaactggattttgaattcatccagacttacacagtc
actattcaggccaccgacggtggggggctctccggaagttgcgtggtacatgtccaggtg
atggatttgaatgacaacgcaccagagctgactatctctacactcattgcacagatccca
gaaaactcggaggagactgtggtggctgtgttcagcgtttcagatcctgactctggagat
aacggaagaatagtgtgctccatccaagatgatgtgcctttcttcctaaaaccctcagtg
gagaacttctacacactcgtggcaaacgcagcactggacagggaggccaaagcccagtac
accatcaccatcacagtctcagacctgggcacgcccaggctgcagagccagcacaacgtg
acagtgcacgtgtccgacgtcaacgacaacgcgcccaccttcagccaggccctgtacacc
ctgttcgtgctggagaacaacagccccgcgctgcacatcggcagcgtgagcgccagcgac
agggacgcgggcggtgctgtggcggtggggtctgggtgtggggtgtctgtgggcgagggc
cacttgttccctgcgggggctgggtgtggtggtgtgggtcctctggtggacgtgggcggg
gcggggacgctgtctcacagctaccagtatgaggtgtgtgtgagtggagggactgggaca
ggtgagttcaaattcacgaagccggttgtccccaacttacttggtcatgatccagtgagg
attaatgaagcaaaccctagtttcagggatagttttgaatataattaa
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