Ochotona princeps (American pika): 101524810
Help
Entry
101524810 CDS
T07609
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101524810 (DDX17)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101524810 (DDX17)
Spliceosome [BR:
opi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101524810 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101524810
NCBI-ProteinID:
XP_004589558
LinkDB
All DBs
Position
4:7027729..7044683
Genome browser
AA seq
650 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPLKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRGETDRAGYANGSGY
GSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTTTTGRSSQSSSQQF
SGLGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtggcggctttggggaccgggaccgggatcgtgaccgtggaggatttggagca
agaggtggtggtggccttcccctgaagaaatttggtaatcctggggagcgtttacgtaaa
aagaaatgggatttgagtgagctccccaagtttgagaagaatttttatgtggaacacccc
gaagtggcaagactgacaccatatgaggttgatgagctacgccggaagaaagagattaca
gtgagaggaggagatgtttgtcctaaacccgtgtttgccttccatcatgctaacttccca
cagtatgtaatggacgtattgatggatcagcacttcacagaaccaacgccgattcagtgc
cagggatttccattggctcttagtggtcgggacatggtgggcattgctcagacgggctct
gggaagacactggcgtatttgctgcctgcaattgtccatattaaccaccagccatacttg
gaaaggggagatggcccaatttgtttggttctggctcctaccagagagcttgcccagcag
gtacagcaagtagctgatgactatgggaaatgttcaagattgaaaagtacttgcatttat
gggggtgcccctaaaggtcctcaaattcgggacttggaacgaggtgttgagatctgcata
gctactcctggacgcctgatcgatttcctggagtcgggaaagacaaatcttcgtcgatgc
acttaccttgtactggatgaggctgacagaatgcttgatatgggctttgaaccccagatc
cgtaaaattgttgatcagatcaggcccgacaggcagactttgatgtggagtgcaacctgg
cccaaagaagtgaggcagctggctgaggacttcctgcgcgattacacacagatcaacgtg
ggcaatctggagctgagcgctaaccacaacatcctgcagattgtggatgtctgcatggag
agtgagaaggaccacaagttgatccagctgatggaagaaatcatggctgaaaaggaaaac
aagacgataatatttgtggagacaaagaggcgctgtgatgacctcacgcgaaggatgcgc
agagatggttggccagctatgtgtatccatggggacaagagtcaaccagaaagagattgg
gttcttaatgagttccgttccggaaaggcccccatcctcattgccacagatgtagcctcc
cgcgggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctca
gaggattatgtgcaccgcattggccgaacagcccgcagcaccaacaagggcacggcctac
accttcttcaccccaggaaatttaaagcaggccagggagctgatcaaggtgctcgaggag
gccaaccaggccatcaatcccaaactgatgcagctggtggaccacagaggcggcggcgga
ggcgggggaggtcgctctcgctaccggaccacctcgtcggccaacaaccccaatctgatg
tatcaggatgagtgtgaccggaggctccgaggcgtcaaggatggtggccggagggactct
gcaagttaccgggatcgtggcgaaaccgatagagctggttatgctaatggcagtggctat
ggaagtccaaattccgcctttggagcacaagcaggccaatacacttatggccaaggcacc
tatggggcagctgcttatggcaccagtggctatacagcccaggaatatggggctggcact
tacggagctagtagcaccaccacaacggggagaagttcacagagctctagccagcagttt
agtgggctaggccggtctgggcagcagccacagccactgatgtcacagcagtttgcacag
cctccaggagccaccaatatgataggttacatggggcagactgcctaccagtatcctcct
cctcctcctccccctcctccttcacgtaaatga
DBGET
integrated database retrieval system
