Ochotona princeps (American pika): 101525023
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Entry
101525023 CDS
T07609
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
101525023 (TTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101525023 (TTF2)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101525023 (TTF2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
101525023
NCBI-ProteinID:
XP_004581927
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All DBs
Position
13:104601893..104641703
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AA seq
1163 aa
AA seq
DB search
MEGVRCPEHGTLCFLKTGVRDGPNKGRSFYVCRTDTCGFVQPTDIQVSHCLLHEDFVVEL
QGLLSSQDKKGYRLFFRCTRSKAEGKHWCGSVPWQDPNYKEHSVTSKPQHVLEPCRHPLQ
QPRNPFKVLDKNQEPTLWKQFLKGDAEDKAAEKPKERSEELFSHEKEQKPGSNCQAETAL
SSGLVLKKPQPAAAGQKQAERMELPRVAKETESTHKRNLPQVKPKQHQRSELSRSSASQE
RPNWESQKGSEAPRVQETEPLPRNVPLPRNVPRPDAAGEPRTGRSLGKEQTAKPAAAGAK
DVGDTTVQPHQKGLSLGPLQPQPVCPGAASKGQAAPGPSPGEGRAAAASSEDSEEEDDPV
ISSHPGSPLLLGTSLNSEKEQSLRLPAPRVHSKPPPASAVSKRVEPSNPAAQRVHLTTQL
KQKKSTLASVNIQVLPDKGQKLLKQIQELEEALSALALSPEPGKVSSEEKNTQVPQKSNF
TKSTTDPPHLVPPQPLRCHDLQPVGSLGLTTAGQVTAAGPGQSCGGYKKQDYLHTVWKIT
SEAIDELHRSLESRPGEAAEAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMG
LGKTLTMIALILTQNNQEANKEKDKNLALTWLSKDDSADFISHGTLIICPASLIHHWKNE
VEKRVNSSKLRVCLYHGPLRTQHAKVLSTYDIVITTYSLVAKEIPTKKQEGEVPGAELSV
EGTSTPLLRIVWARIILDEAHNVKNPRVQTSIAVCKLRARARWAVTGTPIQNNLLDMYSL
LKFLRCSPFDDFNLWRSQVDNGSKKGGERLSILTQSLLLRRTKNQLDSTGKPLVMLPQRK
FQLHQLKLSEDEETVYSVLYARSRSALQSYLKRQESGSNRSGGSPDNPFSRVAQEFGSSG
PGSSVAADSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEDQLNALT
LSELHDPDPSPTVSLNGTCFKVELFEDKRESTKITSLLAELEAIRSNSKSQKSVIVSQWT
SMLRVVALHLKRRGLTYATIDGSVNPKQRMDLVEAFNRSGSPQVMLISLLAGGVGLNLTG
GNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVVHRFVCKGTVEEKILQLQEKKKDLAKQ
VLSGSGESVTKLTLADLKVLFGI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagtgaggtgcccggagcacgggactctgtgctttctgaagaccggcgtccgc
gacggccctaataaaggaaggagcttctacgtgtgccggacggacacgtgcggtttcgtg
cagcccacagacatccaggtctcccactgcctgttgcatgaggacttcgtggtggagctg
cagggtttgttgtcatcacaagacaagaaaggctacaggttgttcttccgctgcaccagg
agtaaagctgaggggaagcactggtgtggaagtgttccgtggcaggatcctaattacaaa
gaacattctgtaaccagtaagcctcagcatgtcctggagccatgccgtcatcctctccaa
cagccaaggaatccattcaaggtgctggacaagaatcaagagcccacgctctggaaacag
ttcctcaaaggggacgctgaggacaaggccgcggagaagccaaaggagaggagtgaggaa
ctcttcagtcacgagaaggaacagaagcccgggtctaactgccaggccgaaacagctctg
tcttctggcctggtgctgaagaaaccgcagcctgcagctgcggggcagaagcaagccgag
agaatggagttgccgcgtgtagccaaggagactgaaagcacacacaaaagaaacttgcct
caagtgaaacccaaacagcatcagaggagtgagttaagcagatcctctgcctctcaggaa
agaccaaactgggagagtcagaaagggtcagaagctccaagagtgcaggagaccgagcct
ttacctcggaacgtacccctacctcggaacgtaccccgaccggacgcagcaggtgagccc
cggacagggcgctccctcggcaaggagcagaccgcaaagccggcggctgcaggagcgaag
gatgtgggagacactacagtgcagcctcaccagaaagggctgtccttggggcctttgcag
ccacagcccgtgtgtccaggggcggcttccaaagggcaggcagccccggggccgtcccca
ggagaggggcgtgcagctgctgcaagcagcgaggacagtgaggaggaggatgatcctgtt
atcagctctcatccaggcagccctctgctcctcggaacgtccctgaactctgagaaggag
cagagtcttcgactgccggctccaagggtgcacagcaagccccctcctgcctcggctgtc
tccaagagggtggaaccctccaaccctgcagcccagcgcgtgcacctgacgacacaactg
aaacaaaagaagagcacattggcatcggtgaatatccaggtccttccagacaagggtcag
aagctgctgaagcaaatccaggagctggaggaagcactcagtgccctagccctctctcca
gaaccaggtaaagtgagctctgaggagaagaacactcaagtgccacaaaagagcaacttc
accaaaagtaccactgaccctccccatttggtgcctcctcaaccacttcggtgtcatgat
ctccagcccgtgggttctctaggactaaccactgcgggccaggtaaccgctgctggccct
ggacagtcctgtggaggctataagaagcaagattaccttcacacagtgtggaaaatcacc
agtgaagccattgatgagctgcatcgatcgcttgagtcccgacctggtgaggcagctgag
gcagaagatccagctgggctgaaggtccctttgctgctacaccagaagcaggcactggcc
tggttactctggcgggaaagtcagaagccacaaggaggaattctggcggacgatatgggc
ctgggaaaaaccctgacaatgattgcactcatcctgacccaaaacaatcaagaggccaac
aaagaaaaggacaaaaacttggctttgacgtggctttccaaagacgactcggctgacttt
atctcccatggaacactgatcatctgccctgcttctctgatccatcactggaagaatgag
gtggagaaacgtgtgaacagcagcaaactcagagtctgtctctaccacgggccgctccgg
acccaacacgccaaagtgctgtcaacatatgacatcgtgatcactacctatagccttgtg
gccaaggagattcccacaaagaagcaagagggagaagttccaggtgcagagctgagtgtg
gagggcacctcaacacctttgcttcgaatagtctgggctcggatcatattagatgaggct
cacaatgtgaagaatccccgagtgcaaacatctatagctgtgtgtaagctacgagcccgt
gcccgttgggctgttactggaacccctattcaaaacaacttgttggatatgtattccctg
ctgaaatttcttcgttgttctccatttgatgatttcaatctgtggagaagtcaggttgac
aatggttcaaagaaaggaggagagcgattaagtattttaacccagagccttttactaagg
agaacaaaaaaccaactggattccacaggcaaacctctggtgatgctgccgcagcgtaaa
tttcagttacaccagttaaagctttctgaagatgaagagactgtatacagtgtcctgtat
gcaagatcaaggtcagctctgcagtcctacctcaaaaggcaagagagtggaagcaaccga
tcaggaggaagtcctgataatcccttcagcagagtggcccaggagttcgggtccagtggg
ccagggtcctccgtggctgcagactcgccaaggtccagcaccgtgcacatattgtcccag
ttgctgagactccgccagtgttgctgtcatctttctttactgaagtcggccctggatccc
acagaactgaagagcgaaggccttgtcctctccctagaagaccagctcaacgctctgacc
ttgtccgaactccatgacccagacccatcacctactgtttcccttaatggcacctgcttc
aaagtggagctctttgaagacaaacgagagagcaccaagataacatctctgttggcagaa
ctggaggcaatccgaagcaattcaaagtcccaaaagagtgttattgtctctcagtggacc
agcatgctccgagttgtagcattgcacctcaagaggcgtggactgacttatgccaccatc
gatggttccgtcaaccccaaacagagaatggatttggtggaagcatttaaccgctccggc
agccctcaggttatgctaatctccctcttggctggaggtgttggtctaaatctgactgga
ggaaaccatctttttcttctggacatgcactggaacccatcacttgaagatcaagcatgt
gaccgaatttaccgagtggggcagcagaaagacgttgtcgtccacagatttgtgtgtaag
gggacagtggaagagaagatcttgcagctccaagagaaaaagaaagatttggccaagcag
gttctatcaggttctggagaatctgtcaccaagcttaccctggctgacctcaaagtcctt
tttggcatctaa
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