Ochotona princeps (American pika): 101525024
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Entry
101525024 CDS
T07609
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04613
Neutrophil extracellular trap formation
opi05034
Alcoholism
opi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101525024 (HDAC9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101525024 (HDAC9)
09165 Substance dependence
05034 Alcoholism
101525024 (HDAC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101525024 (HDAC9)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101525024 (HDAC9)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101525024 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
101525024
NCBI-ProteinID:
XP_004582518
LinkDB
All DBs
Position
10:9344987..9511023
Genome browser
AA seq
576 aa
AA seq
DB search
MLQTIYERDSCFPSDGVAGREQLLAQQGMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQEVERRRRDQQLPPLRGKDRGRERAVASTEVKQKLQE
FLLSKSATKDTPANGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQGS
KDDFPLRKTESSVSSSSPGSGPSSPNNGPTGTVTENETSALPPTTHAEQIVSQQRILIHE
DSMNLLSLYTSPSLPNITLGLPAVSSQLNASNSLKEKQKCETQTLRQGMALPGQYGGSLA
ASNHPHTALEGKPNSSHQALLQHLLLKEQMRQQKLLVTGGVALHPQSPLATKERISPGIR
GSHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQL
KAPGGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTVGQVGAVKVKEEPVDS
DEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagcgtgactcttgttttccctcagatggggtggctggacga
gagcagctcttggctcagcagggaatgcacagcatgatcagctcagtggatgtgaagtca
gaggttcctgtggggctggagcccatctcgcccttggacctgaggacggacctcaggatg
atgatgcctgtggtggaccccgtggtgcgggagaagcagctgcagcaggagttgctgctc
atccagcagcagcagcagatccagaagcagctcctgatcgccgagtttcagaagcagcat
gagaacctgacgcggcaacaccaggctcagcttcaggagcacatcaagttgcaacaggaa
ctcctagccataaaacaacagcaagaactcctagaaaaagagcagaaactggagcagcag
aggcaagaacaggaagtagagaggcgtcgcagagatcagcaacttcctcctctcagaggc
aaagacagaggacgagaaagggcagtggcgagcacagaagtgaaacagaagcttcaagaa
ttcctgttgagtaaatcagcaacaaaagacactccagctaatggcaaaaatcattccgtg
agccgccatcccaagctctggtacacggctgctcaccacacctcattggatcaaagctct
ccaccccttagcgggacgtctccatcctacaaatacacgttaccaggggcgcagggaagc
aaggacgatttcccccttcgcaaaactgaatcttccgtcagtagcagctctcccggatcc
ggtcccagttcaccaaacaatgggccaactggaactgttactgaaaatgagacgtcggct
ctgccaccgactactcacgctgagcaaattgtttcacagcagcgcatcttaattcatgaa
gattccatgaacctgctaagtctttatacctctccttctctgcccaacatcaccctgggg
cttccggcagtgtcgtcccagctcaatgcttcaaattcactcaaagagaaacagaagtgt
gagacccagacgctcaggcaaggcatggcgctgccgggacagtatgggggcagcctggcg
gcatccaaccatccccacactgcattggagggaaaaccaaacagcagccaccaagctctc
ctgcagcatttgttactgaaagaacaaatgcgacaacaaaagctccttgtgaccggtggc
gtcgccttacaccctcagtctcccctggccacaaaagagagaatctcacctggcatcaga
ggttcccacaagctgccccggcacagacccctgaaccgaacccagtcggctcctttgccg
cagagcacgttggcccagctggtcattcagcagcaacaccagcagttcctggagaagcag
aagcagtatcagcagcagatccacatgaacaaactgctttcgaaatctattgaacaactg
aaggcaccaggtggcagtcaccttgaagaagccgaggaagagcttcagggggaccaggcg
atgcaggaagacagagcaccctctagtggcaacagcactaggagcgacagcagtgcttgt
gtggatgacacagtgggacaagttggggctgtgaaggtcaaggaggaaccagtggacagt
gatgaagatgctcagatccaggaaatggaatctggggagcaggctgcttttatgcaacag
gtaataggcaaagatttagctccaggatttgtcattaaagtcattatctga
DBGET
integrated database retrieval system
