Ochotona princeps (American pika): 101525037
Help
Entry
101525037 CDS
T07609
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101525037
Cell adhesion molecules [BR:
opi04515
]
Cadherins
Protocadherins
101525037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101525037
NCBI-ProteinID:
XP_012782806
LinkDB
All DBs
Position
3A:complement(31292363..31327455)
Genome browser
AA seq
972 aa
AA seq
DB search
MKSRGEHSLRQRQVLLLFVFMGGFLAGSESRRYSVAEEKDKGFVIANVAKDLGLRVEELA
SRGAQVVSKGSKQYFQLNQQTGDLLLAEKLDREELCGPTEPCTLHFQILLQNPLQFLTSE
LQVIDVNDHCPVFFEEEMRLTILESTLPGTKFQLGSAEDLDVGLNSLQNYTIDPNSHFHV
LTSSRRDGRKFPELVLDNALDREQQPEMKLQLTALDGGYPARSGTARIHIVVLDVNDNAP
AFARPVYEVQIPESSPVGSVIVTISASDLDAGSFGAISYRFSPGSEDVLRTFQLDSVTGD
VRLVRDLDFEAVRGYEVDVEAKDGGGLVGKSTVLVQVVDVNDNAPELTVSSLNSPIPENS
GETVVAIFSITDLDSGNNGKVVCSIPNELPFKLKPTIQNFYTLVTDGPLDREARAHYTIT
ITVSDLGTPRLQSQHNVTVHVSDVNDNAPTFSQALYTLFVLENNSPALHIGSMMQTKGRH
DKRQVAILMVLMLLWEVGSESIQYSVLEETESGTFVANLTKDLGLGVGELASRGARVVFK
GNRQPLQLDPYTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQAALLIRDINDH
APEFPAREMVLKISEITAPGKIFPLKMAQDLDSGSNSLQSYTVSSNAHFHVVTRNRSDGR
KFPELVLDKALDREEQPHLELTLTAQDGGSPPRSGTAKIKILVLDSNDNAPEFVQERYEA
QVPENSPPGYRVLTVSARDSDAGSFGEVSYALFQVDDVNQPFEIDTITGEVRLRKTMDFE
EFQSYHVDIEATDGGGLTGKCSLFVNVLDVNDNAPELIMSSLFSPVPENARDMVVAVFSV
SDADSGRNQEVVCSIDDKLPFFLRASMENFYTLVTDGPLDREARAHYTITITVSDLGTPR
LQSQHNVTVHVLVDVGGAGTLSHSYQYEVCVSGGTGTGEFKFTKPIVPNFSPEFTGIEIE
NSPSIRNSFPFS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccagaggcgagcactctcttagacaaaggcaagtcctgcttctgtttgttttc
atgggtgggtttcttgctgggtctgagtcgagacgctattctgtggccgaggaaaaagac
aagggcttcgtaatagcaaatgtagcaaaggatttggggctaagggtggaggagctggcc
tcaaggggggcacaggtggtatccaaagggagtaagcagtatttccagcttaaccagcag
accggtgacctgctgctcgctgagaaactggaccgggaggaactgtgtggccccacggaa
ccctgcacgctgcatttccaaatactgctgcaaaaccccctgcagtttcttactagcgag
ctccaggtgatagatgtcaacgaccactgcccggtgttcttcgaagaggaaatgcggctg
acaatcctggaaagcactctgccaggcacaaagttccaattgggaagtgctgaggacttg
gatgtggggctcaacagtcttcaaaactacacgattgaccccaattcccatttccacgtc
ctcacgagcagccgcagggacgggagaaagtttcccgaactggtgctggacaatgcactg
gaccgggagcagcagcctgagatgaagctgcagctcacggcgctggacggcggctatccg
gccaggtccgggaccgcgcggatccatattgtggtcctggacgtgaacgacaacgcgcca
gcgtttgcgcgcccggtctacgaggtgcagattccggaaagcagcccagtgggctccgtg
attgtcaccatctcagcttctgatttagatgccggaagctttggggccatctcctatagg
ttttctcctggttctgaggatgttctcagaacttttcaattagattcagtaactggtgat
gtgagactggtccgcgacttggactttgaggcagtgcgcgggtatgaagtggacgtggag
gccaaggatggcggaggccttgttggaaaatctacagtcctggttcaggtggtggacgtg
aacgacaacgcaccagagctgacagtgtcctcgcttaacagccccatccccgagaactct
ggagagactgtggtggctatcttcagcatcactgacctggattctggaaacaatgggaag
gtcgtgtgctccatccctaacgagcttcctttcaagctgaaacccacaatacagaatttc
tacacactagtaacagacggaccattggacagggaggccagggcccactacaccatcacc
atcacagtctcagacctgggcacgcccaggctgcagagccagcacaacgtgacagtgcac
gtgtccgacgtcaacgacaacgcgcccaccttcagccaggccctgtacaccctgttcgtg
ctggagaacaacagccccgcgctgcacatcggcagcatgatgcaaacaaaagggcggcac
gacaaaaggcaagtggcaatccttatggtgttgatgctgttgtgggaggtgggttcagaa
tccattcagtactcagtactggaagagacggaaagcggcacgtttgtagccaatctgaca
aaggacctgggactgggagtgggagagctggcctcacggggcgccagggttgttttcaaa
gggaacagacaacctctgcagcttgatccgtacacccatgatttgctactaaatgagaaa
ttggaccgggaggagctgtgtggctccacggagccgtgtgtgctgccgttccaggtgtta
ctggaaaatcccctgcagttttttcaggctgccttgctgatcagagatataaatgaccac
gccccggagtttcctgccagagagatggtcctgaaaatatccgaaattactgcgccggga
aaaatattcccattgaaaatggcacaagatttagactcaggcagcaacagccttcagagc
tacacggtgagctccaatgcccacttccacgttgtcacccgcaatcgcagtgacggcaga
aaattcccggaacttgtgctggacaaggcgctagaccgagaggaacagccccatctcgaa
ctgaccctcaccgcgcaggacggcggatccccgccacggtctgggactgcaaagattaag
atcctggtgctggacagcaatgacaacgcccccgagttcgttcaggagcgctatgaggca
caggtcccagaaaacagccccccaggctatcgggttctcaccgtttctgccagagattct
gatgcaggatcctttggggaggtgtcttatgccctatttcaggtcgatgacgttaaccaa
ccctttgaaattgacacaatcacaggagaagttcgactgagaaagactatggactttgag
gaatttcagtcttatcacgtggatattgaagccacagatggcgggggtctcacagggaaa
tgctctttattcgtcaacgtcctggatgtgaatgacaacgcccctgaactgatcatgtca
tcactcttcagccctgtcccagaaaatgcccgagacatggtcgtcgcagtgttcagcgtt
tcagatgcagactctggacgcaatcaggaagtggtttgttctatagacgacaaactccct
tttttcctaagagcatctatggaaaatttctacaccttggtaacagacggacctctggac
agggaggccagggcccactacaccatcaccatcacagtctcagacctgggcacgcccagg
ctgcagagccagcacaacgtgacagtgcacgttctggtggacgtgggcggggcggggacg
ctgtctcacagctaccagtatgaggtgtgtgtgagtggagggactgggacaggtgagttc
aaattcacgaagccaattgtccccaatttttctcctgaatttactgggattgaaatagag
aatagccccagcattcggaatagcttcccattcagttaa
DBGET
integrated database retrieval system
