Ochotona princeps (American pika): 101525094
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Entry
101525094 CDS
T07609
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101525094 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101525094 (BHLHE40)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
101525094 (BHLHE40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF4874
Motif
Other DBs
NCBI-GeneID:
101525094
NCBI-ProteinID:
XP_004581332
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Position
9A:2595172..2598485
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AA seq
414 aa
AA seq
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MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVYRSKRGLKRGEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLIEQQQQKILT
LQSGFQAGELSGRSVEAGQEMFCSGFQTCAREVLQYLANHEHARDLRSSQLVAHLHRVVS
ELLQPGPPRKPAEPAPKAVDFKEKPASLAAGSEGPGKNCVPVIQRTFAPSSGEQSGSDTD
TDSGYGGESEKMDRRGVQPHTGSGRHGRGFAAGERVSAIKQECEEPPTKKSRLQFSDDEG
PFGSSADLLGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNAS
AAALSSFVNPDKLPAPLLLPQRLPSPLPAHPAVDSSALLQALKQIPPLNLETKD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagaggatccccagcgcgcagccgcctcctgcctgcctgcccaaagcgcccgggctg
gagcccggagacctccccgggatggatttcgcccacatgtaccaagtgtacaggtcgaag
cggggactgaagcggggagaggacagcaaggagacctacaagctgcctcatcggctcatt
gagaagaagagacgtgaccggattaacgagtgcatcgcgcagctcaaggacctgctgccc
gaacacctcaaacttacaactctgggccacttggagaaggcggtggtgctggagctgacc
ctgaagcacgtgaaagccctgactagcctgatcgagcagcagcagcagaagatcctgacc
ctgcagagcggtttccaggctggtgagctgtcggggcggagtgtcgaagcaggccaggag
atgttctgttcaggcttccagacctgcgcccgggaggtgctgcagtacctggccaaccac
gagcacgcccgggacctgaggtcctcccagctggtcgcccacctgcatcgcgtggtctct
gagctgctgcagcctggccctcccaggaagccagccgagccagctcccaaggccgtggac
ttcaaggagaagccggcatccctggctgctggctcagaaggccccggaaagaactgtgtc
cccgtcatccagcggacatttgcgccatcgagcggcgagcagagcggcagtgacacagac
acggacagcggctacggaggcgagtcggaaaagatggacaggcgaggtgtgcagccccac
acgggcagcggccgccatggacgcgggtttgctgcaggggagagggtcagcgccatcaag
caggagtgtgaggagccacccaccaaaaagagccgcctgcagttctcggacgatgagggc
ccctttggcagcagtgcggacctcctgggctcgcccttcctcggcccgcacccgcaccag
ccccccttctgcttgcccttctacctgatccccccatcggccaccgcctacctgcccatg
ctggagaagtgctggtaccccacctcggtgcctgtgctgtaccctgggctcaacgcctca
gccgctgctctctccagcttcgtgaaccccgacaagctgcctgcacccctgctgctccca
cagagactcccctcgcccctgccagcccacccggctgtggactcttcggccttgctgcaa
gccctgaaacagatcccgcccttaaacttggaaaccaaagactga
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