Ochotona princeps (American pika): 101525472
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Entry
101525472 CDS
T07609
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
opi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101525472 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101525472 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101525472 (ARID2)
03021 Transcription machinery [BR:
opi03021
]
101525472 (ARID2)
03036 Chromosome and associated proteins [BR:
opi03036
]
101525472 (ARID2)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
ARID
101525472 (ARID2)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101525472 (ARID2)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
101525472 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
101525472
NCBI-ProteinID:
XP_012786004
LinkDB
All DBs
Position
8A:28829091..28950423
Genome browser
AA seq
1565 aa
AA seq
DB search
MAGATGKAPPDERRKGLAFLDELRQFHHSRGSPFRKIPAVGGRELDLHSLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPKDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKVTHIR
SSRAAATQHVAPPPGIVEIDSDKFACQWLNAHFEVNLDCSVSRAEMYSEYLSTCSKLARG
GILTSTGFYKCLRTVFPNHSVKRVEDPSSSGQAHIHVVGVRRRAIPLPIQMYYQQQPVST
PVVRVDSLPDGSTAPTPAGIPHGSQTVGNHYQRTPVTNQSSNLTATPMSFPVQGVHTVAQ
TVSRIPPNSSVHTHQQQNTPVTVLQNKVPVPCEVVKAAVIQNSVPQTAVPTHLAQSSVVQ
NHSAGPPPVPVVNSQTLLHHPSVIPQPSPLHTVAPGQIASGTPVTVIQQALPQSHIFGRV
QNIPACASAVSQGQQLLTTSPQPVQTSSQQTSVGSQPQDTVIIAPPQYVTTSASNIVSAT
SVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKPLPSQQISSTVVQQPIQQPQQPAQQS
VVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNVTPSSSPSPVPATNTQVP
TAPSSSTPQPQGPPPTVSQMLSVKRQQQQQHSPAAQQVQVQQPQQVQVQVQPQQANAGVG
QPASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQAAGFG
VQGQTPAQQLLVGQQNVQLVQSAMPPTGGVQTVPISNLQILPGPLISNSPATIFQGTSGN
QVTITVVPNTSFATATVSQGNASQLMAPAGLAVSGPQAGVGLQMQTLPAAQAAPAGQPSC
APAAPPFRGDKIICQKEEEAKEATGLHVHERKIEIMENPSCRRGNTHTSNGDTQESEMPV
GSLLNGKKYSDSSLPPSNSGKTQGEAHQGSLVSNGPLMDLGENGASGKENSEQMDIQDVK
SDLKKPMVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQGASDGTQRDSAKGD
QLERISNGPVLTLGGSPSASSLQESLNVATQQSGSTDLPNGPLASSLNSDVPQQRPSVVV
SPHSTTSVIQGHQIVTVPHSGPRVSHSALSADIRSANGTAECKTAKRPAEDSDRETVAGI
PSKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKAAIESAAQQKQQHPPTHVQNVVP
QSTPMPPSAAVPAQGQPGSCQPPPSGASGQRGDAVGKPGQSFMCLWQSCKKWFQTPSQVF
YHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQMGS
QKSSTKQPAGGGTSSAPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRL
TAALILKNIGKHSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEQD
SEMLQ
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcgacggggaaggcgcctccggacgagcggagaaaggggctggctttcctg
gacgagctgcggcagttccaccacagccgggggtcgccgtttcggaagatccccgcggtg
ggcggcagggagctggacctgcacagcctctacaccagagtcactactttaggcggcttc
gcgaaggtttctgagaagaaccagtggggagagattgtggaagagttcaactttcccaga
agttgctcgaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaaatat
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
caacttcctattggtgcaattccatcttcctacaattaccagcaacacagcgtgtcagat
tatttgcggcaaagttatgggttatctatggactttaattcgccaaaggattataacaag
ttggtgctctcactgctctctggcctcccgaatgaagtggatttcgctatcaatgtgtgc
actctcctgtcaaatgagagcaagcacgccatgcagctggagaaagaccctaagatcatc
actctgttgcttgctaatgcaggggtgtttgatgacactttaggatccttttccactgtg
tttggagaagaatggaaagagaagacggatagagattttgtgaaggtaactcacataaga
tcttccagagcagctgcaacgcagcatgtcgctccaccccccggcatagtggaaatagac
agcgacaagtttgcttgccagtggctaaatgctcatttcgaagtaaatctagattgttct
gtttctcgggcagaaatgtattctgagtacctctcaacttgcagtaaattagctcgtggc
ggaatcttaacatcaactggattttataaatgtcttagaacggtcttcccgaatcacagc
gtgaagagagtcgaggaccccagcagtagcggacaggcccacattcacgtggtgggcgtc
cgccggagggccatcccactccccattcagatgtactaccagcagcagcccgtgtctact
cctgtggtccgtgttgattctctccctgatgggtccacagctcctacacctgcaggaatc
cctcatggatcacaaactgtaggaaaccattaccagaggactcctgttaccaatcagtct
tcaaatttgactgcaacaccaatgtcttttcctgtacaaggtgttcatactgtggcacag
actgtttcaagaattccaccaaattcttcagttcacacccaccagcagcaaaatactcca
gtgactgtccttcagaataaagttccagttccttgtgaggttgttaaggctgctgtgatc
cagaactccgtgccccagacagcagttcctacacaccttgcccagagttcggtggtacag
aatcacagtgcagggcccccgcctgttccagttgtgaattcccagacgttgcttcaccac
ccatctgtaatcccacagccgtctccattgcacaccgtggcaccaggacagatagcttca
ggcacccccgttacggtcatccagcaagcgctcccacagagtcacatatttggcagagta
cagaatataccagcatgtgcttctgcagtttcacagggtcagcagttgctcaccacctca
ccccaacctgtgcaaacttcatcccagcagacatcagttggtagtcagccacaagacact
gttatcatagcacccccacagtatgtaacaacttccgcatccaatattgtctcagcaact
tcagtgcagaattttcaggtagctacgggacaaatggttactattgctggtgtcccaagt
ccacagccctcgagggtagggtttcagaacattgcaccaaaacctctcccttctcagcaa
atttcatcaacagtggtacagcagcctattcaacaaccacagcaaccagcccaacaaagt
gtggtgattgtaagccagccagctcaacaaggtcaaacgtatgcaccggccattcaccag
attgttctggctaatcccgcagctcttccggctggtcagacagttcagcttaccggacaa
ccgaacgtaactccatcttcttcaccatcacctgtcccagctactaatacccaagtccct
actgccccgtcatcctccacccctcagccacagggaccaccccctactgtcagtcaaatg
ctgtctgtaaaaaggcagcagcagcagcaacactcgcctgcagcacagcaggtccaagtt
cagcagccacagcaagtacaggtgcaggttcagcctcagcaagcaaatgctggagttggg
cagcctgcttctggggagtcgagtctgataaaacagctgctgcttccaaagcggggccct
tcgactccaggtggtaagcttattctcccggccccacagattcctccccccaacaatgca
agagctcccagccctcaggtggtctaccaggtggccaacaaccaagcagcaggctttgga
gtgcaggggcagactccagctcagcaactgttggttgggcagcagaatgtgcagctggtc
caaagtgcaatgccacccacagggggagtgcaaactgtgcccatctcgaacttacaaata
ttgccaggcccactgatctccaacagcccagcgaccattttccaagggacatctggcaac
caggtaaccattacagttgtgccaaatacaagttttgctactgcaactgtgagtcaggga
aacgcatctcagctcatggctccagcaggacttgccgtgagtggtccgcaggcaggagtc
gggcttcagatgcagacgctcccagctgcacaggcagcgcctgcgggacaaccctcatgt
gctcctgctgctcccccattcagaggcgacaagatcatttgccagaaggaggaggaagcc
aaggaagcaacaggtttacatgttcatgaacgtaaaattgaaatcatggaaaacccatcc
tgccggcgaggaaacacccacaccagcaatggggatacacaggagagtgaaatgccagtg
ggaagtctgttgaacgggaagaagtacagtgactcaagtctacctccttcaaactcaggg
aaaactcagggtgaggctcatcagggctccctggtaagcaatgggccattgatggattta
ggtgagaatggagcctctggaaaagagaactcagagcagatggacatacaggatgtcaaa
agtgatttgaaaaaacccatggttaatggaatctgtgattttgataaaggggatggttct
catttaagcaaaaacattccaaatcacaaaacttccaatcatgtagggaatggtgagatt
tctccagtggaaccacaaggggcttcagatggcactcagcgtgacagcgccaaaggtgac
cagctggaaaggatttccaatggacctgtgttaactttgggggggtcgccgtctgcgagc
agtttgcaggagtctttgaatgtggcaacacagcaatctggtagtactgatttgcccaat
ggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagttgtc
tcaccgcattctacaacctctgttatacaggggcatcagatcgtaacagttccccactca
ggaccgcgagtgtcccattctgccctgtcagctgacattcgctctgcaaatggcacagca
gagtgcaaaactgccaagcggccagcagaagacagtgacagggagacagttgcaggaatt
ccaagtaaggtcggagttcgaattgttacaatcagcgaccccaacaacgctggctgcagt
gccacgatggtcgctgtgccggcaggagcagatccaagcactgtagctaaggcagcgata
gaaagtgctgctcagcagaagcagcagcatcccccgacacatgtacagaatgtggtccca
cagagcactcccatgcctccttcagcagctgttcccgctcagggccagcctggcagttgt
cagccgcctccatccggcgcatccgggcagcgcggagacgcagtaggaaagcctggacag
agcttcatgtgtctgtggcagtcttgtaaaaagtggtttcagacgccctcccaggtgttc
taccacgcagctactgagcacggggggaaagacgtgtacccaggccagtgtctgtgggaa
ggctgtgagcccttccagcggcaaaggttttctttcatcacccacttacaggataagcac
tgttcaaaggatgccctgcttgcaggattaaaacaggatgaaccaggacaaatgggaagt
caaaaatcttctaccaagcagccagctggagggggcacaagctctgccccgcgagcccag
aaggccattgtgaaccaccccagcgccgccctcatggccctgaggagggggtcccggaac
ctcgtctttcgtgacttcacagatgaaaaagagggaccaataactaaacacatccgacta
acagctgccttaatcctaaaaaatatcggtaaacactcagagtgtggtcgcagattgcta
aagagacatgaaaacaacctatccgtgcttgctataagcaacatggaagcttcctccacc
cttgccaaatgcctttacgaactcaacttcacagtgcagagcaaagagcaagaacaagac
tcagaaatgctgcagtga
DBGET
integrated database retrieval system
