Ochotona princeps (American pika): 101525525
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Entry
101525525 CDS
T07609
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101525525 (SHANK3)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
Ank_3
PDZ_6
Ank_5
PDZ
SH3_2
FERM_f0
SH3_9
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
101525525
NCBI-ProteinID:
XP_004589747
LinkDB
All DBs
Position
4:complement(36840..87496)
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AA seq
1660 aa
AA seq
DB search
PGASAVVVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHSLQDALNYGLFQPPSRGR
AGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTKANLKKFMDYV
QLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDLLKVLRNGGAHLDFRTRDG
LTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTALYHSALGGGDALCCELLLHDHAQL
GTRDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNASGNTALHVCALYNQESCARVLL
FRGADKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRETPSYAKRRRLAGPSG
LASPRPLQRSASDINLKGEMQPAAPGPSLRSLPHQLLLQRLQEEKDRDRDGEQQNDTSVP
SAGRGSQSKIRLLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDARHETREDRTKRLF
RHYTVGSYDSLTSHSDYVIEDKVAVLQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQ
YLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNRLVMKVVSVTRKP
EEDSSRRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDEILAAAAEPALRP
DIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGIPRTKSVGEDEK
LASLLEGRFPRSTSMQDSVREGRGIPPPPQTAPPPPPAPYYFDSGPPPAFSPPPPPPGRA
YDTVRSSFKPGLEARLGAGTAGLYEPGAALGPLPYPERQKRARSMIILQDSAPETSDGPR
PPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFTPSKPQRRKSPLVKQLQVEDAQERA
ALAVGSPGPGGGSFAREPSPTHRGPRPSGLDYGSEDGLGLAFGGPGPAKDRRLEERRRST
VFLSVGAIEGSPPSADLPSLQPSRSIDERLLGPAATPGRDLLLPSPVSALKPLVSAPSLT
PAGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDADRPGPLFVDVQ
ARDSERGTMASPAFSPRSPAWIPVPVRRESEKAPREERKSPEDKKSLILSVLDTSLQRPA
GLIVVHATSNGQEPSRLGAEEQRPGTPERAPAPMPTTVTTAVAEPLPSPRAQPAGSTPVD
PGHGQGSSEEEPELVFAVSLPPAQLSSSDEETREELARIGLVPPPEEFANGILLATPPPG
LGPPPSTVPGPASGKPGSEPPPAPESAADSGVEEADTRSSSDPHLETTSTISTVSSMSTL
SSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSSDSELTAP
QHHAASAGPARPRYLFQRRSKLWGDPVESRGSPGPEDDRPAVISELSSRLQQLNKDARSL
GEEPAGGLGSLLDPAKKSPIAAARLFSSLGELSTISAQRSPGGPGGSASYSVRPGGRYPV
ARRAPSPVKPASLERVEGLGAGAGGVGRPFGLTPPTILKSSSLSIPHEPKEVRFVVRSVS
ARSRSPSPSPLPSPAPGPGPGAPGPRRPFQQKPLQLWSKFDVGDWLESIHLGEHRDRFED
HEIEGAHLPALTKEDFVELGVTRVGHRMNIERALRQLEGS
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
cccggggccagcgccgtggtcgtgcgcgtggggatcccggacctgcagcagacgaagtgt
ctgcgcctggacccggccgcgcccgtgtgggccgcgaagcaacgagtgctttgcgcgctc
aaccacagcctccaggacgcgctcaactacgggcttttccagccaccctctcggggccgt
gccggcaagttcctagatgaagagcggctcctgcaggactacccgcccaacctggacacg
cctctgccctacctggagttccgatacaagcggcgagtttatgcccagaacctcattgat
gataagcagtttgccaagcttcacacgaaggccaacctgaagaagttcatggactatgtc
cagctacacagcacagacaaggtggcccgcctgctggacaaggggctggaccccaacttc
catgaccctgactcaggagagtgccccctgagtctggcagcccagctggatgatgcaaca
gacttgctgaaggttctgcgaaatggtggggcgcaccttgattttcgcaccagggacggg
ctaactgctgttcactgtgcaacacgccaacggaatgccggggcgctgacgaccctgttg
gacttgggggcgtcgccagactacaaggacagccgtggtctgactgccctgtaccacagt
gccctagggggcggggatgccctctgctgtgagctgcttctccatgaccatgcccagctg
gggaccagggatgagaatggctggcaggagatccaccaggcctgccgctttggccacgtg
cagcacctggagcacctactgttctatggagccgacatgggggcccagaatgcctcgggg
aacacagccttgcatgtgtgtgccctctataaccaggagagctgtgctcgtgtgctgctt
ttccggggagccgacaaggacgtccgcaattacaacagccagacggccttccaggtggcg
atcattgctgggaactttgagcttgctgaagttatcaagacacacaaggactctgacgtt
gtgccattcagggagacccccagctatgcaaagcggcggcgactggctggccccagtggc
ctggcgtcccctcggcccctgcagcgctcagccagtgacatcaacctgaagggtgagatg
caaccagcagctcctggaccctccctacgaagcctcccacaccagttgctgctccagcgg
ctgcaggaagagaaggaccgggaccgggacggcgagcagcagaatgacaccagtgtcccc
tccgcaggcaggggaagccagagcaagatcaggttgctcagcattggggagggcggattc
tgggagggcaccgtgaagggccgcacaggctggttcccggccgactgcgtggaggaggtg
cagatgaggcagtatgacgcccggcatgagacacgagaggaccggaccaagcggctcttc
cgccattacacagtgggttcttatgacagcctcacctcacacagtgactatgtcattgag
gacaaggtggctgtgctgcaaaagcgtgaccacgagggcttcggctttgtgctccggggt
gcgaaggcagagacccccatcgaggagttcacacccacgccggccttccctgctctgcaa
taccttgagtccgtggatgtggagggcgtggcctggagggctgggctgcgcacaggggac
ttcctcattgaggtgaatggggtcaacgtggtcaaggttggccacaagcaggtggtggcg
ctgatccgccagggcggcaaccgcctggtcatgaaggtcgtgtctgtcacaagaaagcct
gaggaggacagctccaggcgcagagccccaccacccccaaagagggcacccagcaccacg
ctgaccctgcgctctaagtccatgactgctgagctcgaggaattggcctccatccggaga
agaaaaggggagaagctggatgagatcctggcagctgctgcagagccagctctgaggccg
gacattgcggatgccgactcccgggccgccacggtcaagcagagacccaccagtcggagg
atcacccctgccgagatcagttcactgtttgaacgccaaggcctccctggcccagagaag
ctgccaggttctctgcggaaggggattccacggaccaagtctgtaggggaggacgagaag
ctggcctccctactggaggggcgcttcccccggagcacgtccatgcaggactcggtgcgg
gagggccgtggcatcccgcccccgccgcagaccgcacccccgcccccgccagccccctac
tacttcgactcggggccaccacccgctttctcgccaccacctccgccaccgggccgtgcc
tacgacacagtacgctccagcttcaagccgggcctggaggcgcgcctgggtgcgggcacc
gcaggcctctatgagcctggcgctgccctgggcccactgccctacccagaacggcagaag
cgcgcgcgttccatgatcatcctgcaggactctgcgccggagacgagcgacggccccagg
cccccgccagcggccacaccgccggagcgccccaagcgccggccccgccctccggggccc
gacagcccctacgccaacctgggcgccttcagcgccagcctcttcacgccatccaagccg
cagcgccgcaagagtccactggtgaagcagctacaggtggaggatgcacaggagcgtgca
gcactggctgtgggtagccctggccctggaggtggcagctttgctcgtgagccatccccg
acgcaccgcgggccacggccaagtggccttgattatggctccgaggatgggcttgggctt
gcatttggaggaccaggcccggccaaggaccggcgtctggaggagcggcgccgttccacg
gtgttcttatcagtgggtgccattgaaggcagcccgcccagcgctgacctgccatccctg
cagccttcacggtccatcgatgagcgcctgctgggcccagccgccactcctggccgtgac
ctgctgctgccctcccctgtatccgctctgaagccattggtcagcgccccaagcctgacg
cctgcgggttccaccttcatccaccccctcactggcaagcccctggaccccagctcaccc
ttggccctcgctctggctgcccgggaacgggccctagcctcccaggcaccctcaagatcc
cccactccagtgcacagccctgatgctgatcgcccaggacccctgtttgtggatgtgcag
gcccgagactcagagcggggaaccatggcctccccggccttctccccgcgaagcccagcc
tggattcctgtgccagtccgcagggagtcagagaaggcaccccgggaagagcgcaagtcc
cctgaggacaagaaatccttgatcctcagtgtcctggacacctccctgcagcggccggcc
ggcctcatcgtggtgcatgccaccagcaacgggcaggagcccagcaggctgggggctgaa
gagcagcgtccgggcaccccggagcgggccccagcccccatgcccaccacggtgacaaca
gccgtggcagagcccctgcccagtcccagggcccagcctgctggcagcaccccagtggac
ccagggcatggccagggcagctctgaggaggagcctgagctggtgtttgctgtgagtctc
ccgcctgcccagctgtcctccagtgatgaggagacccgggaggagctggcccgcattgga
ctggtgccgcccccagaagagtttgccaatggaatcctgctggccacgccgccacccggc
ctggggcccccgccctccacagtgcccggcccggcctcagggaagcctggcagtgagcca
ccccctgcacccgagtcggcggccgactcgggtgtggaggaggccgacacgcgcagttcc
agtgacccccatctggagaccacaagcaccatctccacagtgtccagcatgtccactctg
agctctgaaagtggggagctcactgacactcacacctccttcgccgacggacacactttt
ctactcgagaagccgccagtgcctcccaagcccaagctcaagtcccccctggggaagggg
ccggtgaccttcagggaccccctgctgaagcagtcctcagacagcgagctcacggccccc
cagcaccatgccgcctctgccgggcctgcccgcccacgctacctcttccagagaaggtcc
aagctgtggggggaccccgtggagagccgggggtcccccgggcctgaagatgaccggcca
gccgtgatcagcgagctcagctcccggctgcagcaactcaacaaagatgcccgctccctg
ggggaggagcccgcgggtggcctgggcagcctgctcgacccagccaagaagtctcccatt
gcagcagctcggctcttcagcagcctcggtgagctgagcaccatctcagcgcagcgcagc
ccaggaggccctggtggctcggcctcctactcggtgcggccaggtggccgctaccccgtg
gcgcggcgtgccccgagcccagtgaagcccgcgtcgctggagcgggtggaggggctgggt
gcgggcgcggggggcgttgggcggcccttcggcctcacgccccccaccatcctcaagtcg
tccagcctctccattccacacgagcccaaggaggtgcgcttcgtggttcgcagcgtgagc
gcgcgcagccggtcaccgtcgccgtcgccgctgccctcgcctgcgcctggcccaggccct
ggcgcgcctggcccgcgccggcccttccagcagaaaccgttacagctgtggagcaaattc
gacgtgggcgactggctggagagcatccacctgggcgaacaccgtgatcgctttgaggac
cacgagatcgagggcgcgcacctgcctgcgctcaccaaggaggatttcgtggagctgggc
gtcacgcgcgtgggccaccgcatgaacatcgagcgtgctctgcggcagctggagggcagc
tga
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