Ochotona princeps (American pika): 101525532
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Entry
101525532 CDS
T07609
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101525532
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101525532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
Motif
Other DBs
NCBI-GeneID:
101525532
NCBI-ProteinID:
XP_012784375
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Position
21:21703940..21790921
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AA seq
1112 aa
AA seq
DB search
MKLLKPTWVNHNGECARGSQEAEAGVGAGARGARGQIRGGARRPLAQLAAPGARGSRRRS
RRERTLSCVPAIRGHVLRASLVAPPQARAPSPCAAWHVPRSRPGMTVPSAGEGKPGLGLQ
LGESKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLCQMDNH
LACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCVSILRS
HSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDPVGKYI
ASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPT
AQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCCAVGSKDRSL
SVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQDELGDPLSEE
EKSRIHQSTYGKSLAIMTEAQLSTAVIENPEMLKYQRRQQQQQLDQKSVASRDTSSASSV
AGVVNGESLEDIRKDNATYLLLAPAETKDFSTAFFNSIPLSGSLAGTMLSSHSSQQLLPL
DSSTPNSFSTSKPCTEPVAAAGTRPAGEPISKDSVNATSTPAAPSPSVLTTPSKIEPMKA
FDSRFTERSKATPGPPALTSMTPPTVERLKEQNLVKDLRPRDLLESSSDSDEKVPLTKTS
SLSKRKLELEVETVEKKKKGRPRKDSRLLPVSLSVQSPAALSEKEAMCLSAPALALKLPV
PGPQRAFTLQVSSDPSMYIEVENEVTAVGGVKLSRLKCNREGKEWETVLTSRILTAAGSC
DLVCVACEKRMLSVFSTCGRRLLPPILLPSPISTLHCTGSYVMALTAAATLSVWDVHRQA
VVVKEESLHSILAGSDMTVSQILLTQHGIPVMNLSDGKAYCFNPSLSTWNLVSDKQDSLA
QCADFRSSLPSQDAMLCSGPLAIIQGRTSNSGRQAARLFSVPHVVQQETTLAYLENQVAA
ALTLQSSHEYRHWLLLYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTVVGLRKRE
LLKELLPVIGQNLRFQRLFTECQEQLDILRDK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgaagccgacctgggtcaaccacaatggtgagtgcgctcgggggtcgcag
gaggccgaggccggagtcggcgcgggggcgcggggggcccggggtcagatccggggcggc
gcgcgcaggccccttgcccagctggctgctccgggtgcccgggggagccggaggaggagc
cggcgggagcggactttgtcctgcgtcccggcgatccgggggcacgtgctccgagcctcc
ctggttgcacccccccaggcccgggcgccgagcccctgcgcggcctggcacgtcccgcgg
agccggccagggatgacagtgccctcagccggagaggggaagccggggctgggcttgcag
ctcggggagagcaagccaattttttcagttgatattcatcctgacgggaccaagtttgca
actggaggacaagggcaggattctgggaaggttgtgatctggaatatgtctccagtcctc
caggaggatgacgagaaggatgaaaatattcccaagatgctttgccagatggacaatcac
ttagcatgtgtgaactgtgtgcggtggtcaaacagtgggatgtatttagcttctggggga
gatgacaaactgataatggtgtggaagcgggctacgtacatcggccccagcaccgtgttc
ggctccagtggtaagcttgccaatgtggagcagtggcggtgtgtctccatcctccggagt
cattcaggcgatgtgatggatgtggcgtggtctccccacgacgcctggctagcctcctgc
agtgtggacaatactgtcgttatctggaatgccgtcaagttcccagaaattcttgctaca
ctgagaggtcattccggcttggtgaaggggctgacctgggaccctgtgggcaaatatatc
gcttctcaagctgatgaccgtagcctgaaggtgtggaggaccctggactggcagctcgag
accagcatcaccaagccctttgatgagtgtggagggacgacccatgtattgcggctcagc
tggtcccctgatgggcattacctagtgtctgcccacgccatgaacaactctggccccacc
gcccagatcattgaacgggaaggctggaagacaaacatggattttgttgggcaccggaaa
gctgtgactgttgtgaaattcaacccaaaaatcttcaaaaagaagcagaagaatgggagt
tctgcgaagcccagctgcccgtactgctgctgtgctgtcggcagcaaggatcgctcgctg
tctgtctggctcacgtgtctgaaacggcccctggttgtcatccatgagctgtttgacaaa
tccattatggatatttcctggacgctgaatggtctgggcatcctggtgtgctccatggat
ggctctgtggcgttcctcgacttctcccaggatgagctcggagacccgctgagcgaggag
gagaagagccgcatccaccagtccacctatggcaagagcctggccatcatgaccgaggcc
cagctttccacagctgtcatcgagaaccccgagatgctcaagtaccagcggaggcagcag
cagcagcaactggaccagaagagtgtggcaagcagagacacaagctcagcctcctcagtc
gcaggtgttgtcaatggggagagtttggaagacatcaggaaggataatgccacctacctt
ttgttagcaccagctgagaccaaggacttctccacggcattcttcaacagcatccccctc
tcaggctccctggcaggcaccatgctctcctctcatagcagtcagcagctactgccactg
gactccagcacccccaactccttcagcacctcaaagccttgcacagagcccgtggcagcc
gctggtaccaggcctgcgggcgaacctatcagtaaggacagtgtgaatgctacctctact
cctgccgcaccatcaccctccgtgttaacgaccccgtccaagatcgaacccatgaaggcc
tttgactcccgattcacagagcgatctaaagccacgccgggcccccctgccttgaccagt
atgactccaccaactgttgaaaggttgaaagagcagaaccttgtgaaagacctgcggccc
cgggacctcctggaaagcagcagcgacagcgatgagaaggtccctctgaccaagacttcc
tcactgtccaagcgaaaacttgagcttgaggtggagacggtggagaagaagaagaaaggg
cgccctcggaaggactcccgcctcctgcctgtgtctttgtctgtccagtctccagctgcc
ctgtcggagaaggaggccatgtgtctgtctgcaccagcacttgccctgaagctgccggtt
ccaggcccccagagagcgtttactctccaggtgagctccgacccctccatgtacattgag
gtggagaatgaagtgacggctgtcgggggcgtgaagctgagccgtctgaagtgcaaccgg
gaagggaaggagtgggagacggtgctcaccagccggatcctcactgccgcgggcagctgt
gacttggtgtgtgttgcttgtgagaagaggatgctgtcagtgttctcgacctgcggccgc
cgcctcctccctcccatcctcctgccgtccccgatctctactttgcactgcacgggctcc
tacgtcatggctctcacggctgcagccacactgtccgtctgggatgttcacaggcaggca
gtggtggtgaaagaagagtctctacactccatcttggcaggaagtgatatgacggtgtcg
cagatcctgctgacacagcatggaatccctgtgatgaacctgtccgatgggaaggcatac
tgcttcaatccgtcactttctacatggaacttggtttctgataagcaggactccctggcc
cagtgtgcggacttcaggagcagcctgccatcccaggatgccatgctgtgctcaggaccc
ttagccataatccagggccgcacctccaactcgggaaggcaggctgcccggctcttctcc
gtgcctcacgtggtgcagcaggagaccaccctggcctacctagagaaccaggtcgccgcg
gcactcaccctgcagtccagccacgagtaccgtcattggctcctcctctatgcgcggtac
cttgtgaatgaagggtttgaatatcgactccgagaaatatgcaaggacttactgggtcca
gttcactactccactggaagccagtgggaatcaacagtagtgggtctgcgcaagagggag
ctgctcaaagagctgctgccggtcatcgggcagaacctccgcttccagcgcctcttcacc
gagtgtcaggagcagctcgacatcctgagggacaagtag
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