Ochotona princeps (American pika): 101525539
Help
Entry
101525539 CDS
T07609
Symbol
MMP28
Name
(RefSeq) matrix metalloproteinase-28
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101525539 (MMP28)
Peptidases and inhibitors [BR:
opi01002
]
Metallo peptidases
Family M10
101525539 (MMP28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_4
DUF4953
Reprolysin_5
Reprolysin_3
Metallopep
Peptidase_M66
Reprolysin_2
Peptidase_M54
Frataxin_Cyay
Motif
Other DBs
NCBI-GeneID:
101525539
NCBI-ProteinID:
XP_004593912
LinkDB
All DBs
Position
19:complement(23830496..23854296)
Genome browser
AA seq
519 aa
AA seq
DB search
MRARVSLLLRALPLLLWGGLAAEPVGRAGRELRQEAEAFLEKYGYLDGQVSKAPTSTQFS
NAIREFQWVSQLPVSGVLDRATLHQMMRPRCGVADTDSQASWAERIGALFAGRAAKMRRK
KRFARQGNRWYKQHLSYRLVNWPERLPESAVRGAVHAAFQLWSNVSALEFWEAPATVPAD
IRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRGRNLFVVLAHE
IGHTLGLTHSPAPRALMAPYYKRLGRDALLSWDDVLAVQRLYGKPLGRSVAAQLPGKLFT
DFEAWDPHGPQDRRPETQSPKYCHSPFDAITVDGQQQLYIFKGGYFWEVTADGNVSEPRP
LQDRWTGLPPNIEAAAVSLEDGDFYFFKGSRCWRFRGPEPVRGSPQLCRAGGLPRHPDAA
LFFPPLRRLVLFKGARYYVLAPGQPRVEPYYPRSLRDWGGVPKEISGALPRPDGSILFFR
DDRYWSLDQARLRVTTSGRWATELPWMGCWHANSGGTLF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgcgcgtgagtctcctgctgcgcgccctgccgctgctgctgtggggtggcctg
gccgccgagcctgtggggcgcgccggccgggagctgcgccaggaggcggaggccttcctg
gagaagtatggatacctagatggacaagtctccaaagctcccacctctacacaattcagc
aatgccatcagagagttccagtgggtgtcccagctgccagtcagtggtgtgctagaccgg
gccaccctgcaccaaatgatgcgtccccgctgtggggtcgcagacactgacagtcaggcc
tcctgggctgagaggatcggtgccctgtttgctggacgtgcagccaaaatgagacgtaag
aaacgctttgcaaggcaaggcaataggtggtacaagcagcacctttcctaccgcctggtg
aactggcctgagcgcctgcctgagtccgcagtgcggggcgccgtgcacgctgccttccag
ctgtggagcaacgtctcagccctggagttctgggaggctccggccacagtccccgccgac
atccgccttaccttcttccaaggggaccacaacgacgggcttggcaatgccttcgatggc
ccagggggagctctggcgcacgccttcctgccccgcaggggtgaggcgcacttcgaccag
gacgagcgctggtccctgagccgccgcgggcgcaacctgttcgtggtgctggcgcacgag
attggccacacgctgggccttacccactcacccgcgccgcgcgccctcatggcgccttac
tacaagaggctgggccgtgacgcgctgctcagctgggacgacgtgctggccgtgcagcgg
ctctacgggaagcccctggggcgctccgtggctgcccagctccccgggaaactgttcaca
gattttgaagcctgggacccccatggcccccaggacaggcgacctgaaacccagagtccc
aagtactgccactctcccttcgatgccatcactgtagacgggcagcagcagctgtacatt
tttaaagggggctacttctgggaggtgacagcggatggcaacgtttcagagccccgtcca
cttcaggacaggtggactgggctgccccccaacattgaggcggccgcagtgtcgctggag
gatggagacttctacttcttcaaaggcagtcggtgctggagattccggggccctgagcca
gtgcggggttcaccgcagctgtgtcgagcagggggcctgccccgtcaccccgacgctgcc
ctcttcttcccacctctgcgtcgcctggtcctcttcaagggtgcccgctactacgtgctg
gccccgggacaaccgcgtgtggagccctactacccccgaagcttgcgggactggggcggt
gtccccaaggagatcagcggcgccctgccgaggcctgatggctccatcctcttcttcaga
gacgatcgctactggagcctggaccaggccagactgcgggtcaccacctcaggccgctgg
gccacggagctgccctggatggggtgctggcacgccaactcggggggcaccctgttctga
DBGET
integrated database retrieval system
