Ochotona princeps (American pika): 101525587
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Entry
101525587 CDS
T07609
Symbol
SYDE2
Name
(RefSeq) rho GTPase-activating protein SYDE2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101525587 (SYDE2)
Membrane trafficking [BR:
opi04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
101525587 (SYDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Ribosomal_S30AE
Motif
Other DBs
NCBI-GeneID:
101525587
NCBI-ProteinID:
XP_004582255
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All DBs
Position
13:complement(74699116..74750913)
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AA seq
1122 aa
AA seq
DB search
MHDLPPDSGTRRGGGDLAGYGCPAGSRAPGQPPHPRGGTGGGACAPVWELGEGDCSGQQV
SPPGSPRRELGGDQLQTRRMRLPCSRSLESLPVGARPPPLQRWPSDSWIRCGSRRDPDEP
SPRGGRMDGWSPGSAGAAAAPPGLLPPCSQNSGRPSGSPLSEPAGSSVMRGGQGDLPEGP
PCLKPPAVTVKKLQKWMYKGRLLSLGMKGRARTGTPSKVAGAQAAAANRGALKVCDNHVL
SVSPDQRITLTDLLENVYGSSVKRRELEDLKDNIEFSGHKPLNNITVSKKRNWLYQSTLR
SLEEESKKCQERSHLPISPVTPPKHQLSQPLLKTSEEYCTYMMCNTTEPALSRNCSLDCN
EENDADDEGEIWYNPIPEDDDLSMSSALSFGEPHSAGQKLPAVSWSTVSGSALKKAEQHP
EDASHSSEHTGDAHTVQSSEMHPMDPIHPTEFGQQCKPKLGHKTQESVLLEGSPTSKSLF
SGPGILAATNRTELGITEPSSPSPSPVKKSSSINWSLPDKIKSPRTVRKLSMKMKKLPEF
SRKLSVRGTLNYVNGPDNTASLSKCNCQEIHHTVILPSGNTTTVAKRNVISRYHLDTSVT
SQHSYQKKSVVSSKYSCKGGYLSDGDSPELVTKSSKHGSENKFGKGREIIPTTCNKNEID
IDAFRHYSFSDQPKCSQYISGLMSVHFYGAEDLKPPRVDSKDVFCAIQVDSVNKARTALL
TCKTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRRNRVCCHGTVVLPTLFRVTKTHQLA
VKLEPRGLIYVKVTLMEQWENSLHGLDQNRESVIFGVDIRKVVEKENVGLMVPLLIQKCI
MEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSKAVGLCEKEYPDINVITGVLKDYLRE
LPSPLITKQLYEAVLEAMAKSPLKMSSNGCENDPSDSKYTVDLLDYLPDVEKVSIIMQRL
TAKESTDNLFAEQTSSLRYLRRKKERPYMLNLSGTESLGVLRPRQTRLDSPLSNRYAGDW
SSCGENYFLNTKENSSDKDYDHVHSDYRENAEDYGKMNGPEIMIEQPVSMSKECAFQTYL
TVQTIESTVERKANLKDLQESIDILIGNLERELNKNKLNISV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacctgcccccggactcgggcacgcggcggggcggcggggacttggcgggttac
ggctgccccgcgggatcccgggctccgggccagccacctcacccccgcggcggtactggc
ggcggagcttgcgctccagtctgggagctgggagaaggcgactgctctgggcagcaggtg
tccccgcccggatcgcctcggagggaactggggggagaccagctgcagactcgtcggatg
cggctgccctgcagcaggagcctcgagagcctcccggtgggtgcgaggccgcctcccctt
cagcggtggccgagcgatagctggatcaggtgcggctcacgccgggacccggacgagccc
tcgccacgtggaggcaggatggacggctggagcccgggcagcgcaggggccgccgcggcg
cccccgggactcttgccgccctgctcccagaactccggccgcccttcgggaagccctttg
agcgagcctgcggggtcctcagtgatgcgcggcggccaaggagacctcccggagggaccc
ccttgcctcaagccgcccgcggtgacagtgaagaaactgcagaagtggatgtacaaagga
cgcctgctgtccctggggatgaagggtcgtgcccgtactgggacaccttccaaagtcgcg
ggagcgcaggcggccgctgcgaaccggggcgctttgaaagtgtgcgacaaccacgtcctt
tcggtatctccggaccaaagaataacgctgacagatttgcttgaaaatgtttatgggtct
tcagtaaagagaagggaacttgaagatctgaaggataatattgagttcagtggtcataag
ccacttaacaacatcactgtttcaaagaaacgcaattggctatatcagagtaccctgaga
tctctggaggaagaaagtaagaaatgccaagagagaagtcatttacccatctcacctgtc
actccacctaaacatcaactatctcaacctctcctcaaaacatcggaagaatactgtaca
tatatgatgtgtaatactacagagcctgccttatcaagaaactgttctttagattgtaat
gaggaaaatgatgcagatgatgaaggagaaatatggtacaaccccattcctgaggatgac
gacctcagtatgtcgagtgccttgagctttggtgagccacactcagctggtcagaagctt
ccggccgtcagttggagcacagtatctggcagtgctctgaaaaaagcagagcaacatcct
gaagatgcatctcactcctctgaacacacaggtgatgcacacactgtgcagtcaagtgaa
atgcatcctatggatcccatccatcctacagaatttggacagcagtgcaagccaaagcta
ggacacaagacacaagaaagtgtgctgttagagggtagtcctacatcaaaatctcttttt
tcaggtcctggtatcctagctgctacaaataggactgaattgggaattacagaaccatct
tctccaagccctagccctgtaaagaaaagcagttcaattaattggtctttaccagataaa
ataaaatctccacggactgtgaggaaactttctatgaaaatgaaaaagttgccagaattt
agccgaaaactgagtgttaggggaaccttgaattatgtaaatggtccagataatactgct
tccttgtccaaatgtaactgtcaagaaattcatcacactgttattctgccttctgggaat
acaaccacagttgcaaagagaaatgttataagccggtaccatcttgataccagtgtaact
tctcagcacagctaccagaagaaaagcgttgtgagttctaagtattcctgcaaaggtggt
tacctcagtgatggagattcacctgaacttgtaactaaatctagcaagcatggctctgaa
aataaatttggaaaaggaagagaaataattccaactacttgtaacaaaaatgaaatagac
attgatgcttttcggcattacagtttttctgatcagccaaagtgttcgcagtatatatct
ggcctcatgagtgtgcatttctatggtgctgaggatttaaaaccccccagggtagactca
aaagatgtcttttgtgcaattcaggtagactcagtgaacaaggcaagaacagctttactc
acatgtaaaacaacatttttagacatggatcacactttcaacatagaaattgaaaatgca
cagcatttgaaactagtggtatttagttgggaacctactccaagaagaaaccgagtgtgt
tgccatggaactgttgtcctgcccaccttattcagagtgacaaagacacatcaattggca
gttaaattggaacctagaggtcttatttatgtgaaagtgactcttatggaacaatgggag
aattctcttcatggactggatcagaaccgagaatcagtaatatttggtgttgatattcga
aaagttgtggaaaaagagaatgtaggactgatggtgccacttctgatacagaaatgtatc
atggaaattgaaaagaggggctgtcaggtagtaggcctgtatcggttatgtggttcggca
gcagtcaagaaagaacttcgagaggcttttgagagggatagcaaagctgttggtttgtgt
gaaaaagagtacccagatataaatgtaataacaggtgttcttaaggattaccttagagaa
cttccttctcctctgataacaaagcagctttatgaggctgtgttagaagcaatggcaaaa
agccctttgaaaatgtcatcgaatggttgtgagaatgacccaagtgactctaagtacact
gtagacctactggattacctgccagatgttgagaaggtaagcataattatgcaacgttta
actgccaaagaatcaacagacaatttgttcgctgagcagacgtcttctctgcgttatttg
aggcggaagaaagagcgaccttacatgttaaatctgagtggaactgaatcgctgggagtc
ctcaggccaaggcaaaccagattagacagtccgcttagcaatcgttatgcaggagactgg
agtagctgtggagaaaactattttttaaatacaaaggaaaattcaagtgataaagattat
gatcatgtgcattcagattacagggaaaatgcagaagactatggcaaaatgaatggacct
gagataatgattgaacagccggtttccatgtccaaagagtgtgcatttcagacgtatttg
acagtacagaccattgagtccacagtggagcgaaaagccaacctcaaagatctacaagaa
agcattgatattttgattggcaatctggaacgtgaactcaacaagaacaaacttaatata
agtgtttga
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