Ochotona princeps (American pika): 101525740
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Entry
101525740 CDS
T07609
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X2
KO
K17925
sorting nexin-13
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101525740 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101525740 (SNX13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
COX5A
Motif
Other DBs
NCBI-GeneID:
101525740
NCBI-ProteinID:
XP_004582522
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All DBs
Position
10:complement(8697635..8803734)
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AA seq
957 aa
AA seq
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MLTEASLSIWGWGSLGIVLCLITFGPFVIFYLAFYILCFVGGGLVVTLLFGKTSSEKHLE
QCEHSFLPPTSTGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNAIVQFATRSKEIDWQPYFTTRLVDDFGTHLRVFRKAQQKVT
EKDDQVKGTAEDLVETFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGVLLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
LSRQRDGKHQTKQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
RSINLSLDDLSSVSSDDSTQLHAYISDTGVCNDHGKTYALYAITVHRRSLNSEEMWKTYR
RYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMK
ASPALAHCVCDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTK
MSDNMGRMSERLGQDIKQSFFKVPPLIPKADSDPEHCRVSAQLDDNVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADSVKRFRDA
FWPNGILAEALPCRDKAIRMRTRVAGKTKLLAIMPDELKHIIGAETTRKGILRVFEMFQH
HQLNRRMVYVFLEGFLETLFPQYKFRELFNRLHSRSKQMQKYKEKLQTTQAPSLQKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagaggctagtctgtccatatggggatggggaagcctcggcattgtcctttgc
ctgataaccttcggaccctttgtaatattttatttggcattttatatcctctgctttgtg
ggtgggggtttagtggttactctcttgtttggaaaaacaagctcagagaagcacctagag
cagtgtgaacattcgtttcttcctcccacgtcgactggggttcctaagtgcttagaagaa
atgaaacgggaagccagaactattaagattgatagaagattgacgggtgccaatataatt
gatgaacctctccagcaagttatccagttttctttgagggactatgttcagtattggtat
tatacactaagtgatgatgaatcttttcttcttgaaattagacagactcttcagaatgcc
atcgttcagtttgctactaggtcaaaagaaatcgattggcagccttattttaccacacgc
cttgtggatgattttggcacacaccttcgagtattcagaaaggctcaacagaaagtaaca
gagaaagatgatcaagtaaaaggtacagcagaagaccttgtagaaaccttctttgaagtt
gaagtggaaatggagaaggatgtttgccgtgacctcgtgtgcacttctcccaaggatgaa
gaaggattcctaagggatttgtgtgaagtcttactgtacttgctgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgaggagttcttctt
ccattaataaatcaactcagtgatcctgattatattaatcagtatgtcatatggatgatc
cgtgattctaattgcaactatgaggcctttatgaacattattaaattgagtgacaacatt
ggagagctggaagcagtcagggataaggcagcagaagaattacagtatcttagatcgctg
gatacagctggtgatgatatcaacactatcaaaaatcagataaatagcttattatttgta
aagaaagtatgtgattcaagaatacagcgattgcagtcaggcaaagaaataaatactgtg
aaacttgcagcaaattttgggaagctttgcacagtccccttggacagcattcttgtagat
aatgttgcactacaattttttatggattacatgcagcaaactggaggtcaggcacatctt
ttcttctggatgacagtggagggataccgggttacagcccagcaacagttagaggtgtta
ttaagtcgtcaaagggatggaaaacatcaaaccaagcaaaccaaaggtcttctaagagca
gcagctgttgggatttatgaacagtatttatcagaaaaggcatctccaagagttactgtg
gatgactatttagttgcaaaattagcagatactttgaatcatgaagatccaacccctgaa
atctttgatgacattcaaagaaaggtgtatgaattgatgctacgagatgaaagattctac
ccttccttcagacagaatgcattatatgtacgcatgctagcagaactggacatgttgaaa
gatcctagtttccgaggatccgatgatggggatggagaatcttttaatgggtctcctaca
agaagcataaatttgtctctagatgacctttccagcgtgtcttcggatgactcgacccag
ctgcacgcttacatttcagacactggcgtttgtaatgatcatggcaagacctatgccttg
tacgctatcaccgtgcatcggcgcagtctcaacagtgaggagatgtggaagacctatcgt
cgctacagtgacttccatgacttccacatgaggatcactgagcagtttgaaaatctgtca
agcatattgaagcttcctggcaaaaaaacttttaataatatggatagagattttttagaa
aagagaaaaaaagatctaaatgcatatttgcagttactgttaacccccgagatgatgaaa
gcatccccagcgttggcacactgtgtgtgtgatttcctggagaacaaagcctacagcaaa
gggaaaggggactttgctcgcaagatggatacttttgtaaatcctcttcgcaattctatg
aggaacgtttcaaatgctgttaaatctcttcctgatagcctggcagaaggaatgactaaa
atgtcagacaacatgggcagaatgtcagaaagattaggtcaagacataaagcaatcgttt
ttcaaggtccctcctttaatcccaaaggctgattctgatcctgagcactgtcgagtctcg
gctcaactggatgacaatgtggatgacaatattccacttagggtgatgttacttctcatg
gatgaagtgtttgacttaaaagagagaaaccagtggttgcgaaggaatatcaaaaacctg
cttcaacagcttatcagagccacatatggtgataccattaataggaaaatagttgaccat
gttgactggatgacctcacctgagcaagttgctgactcagtgaagcgtttcagagatgcg
ttttggccaaatggcatcttagcagaggctcttccatgcagagataaagctattcgaatg
agaacacgagtagcaggaaaaacgaaattacttgcaattatgccagacgaactgaagcac
attattggggctgagacgacacggaaaggcattcttcgtgtttttgaaatgttccagcac
caccagttaaatcggagaatggtttatgtcttcttggaaggctttttagaaaccttattt
ccacagtacaaattccgtgaacttttcaacagactacattcacggtctaagcagatgcag
aaatataaagaaaaactacagactactcaagcgccttctttacagaaaaggtga
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